Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0341 ATGAGGTTGAGGGAGGAATTACCCTTTACGAATGGTGAAGATGAGAAAGACGAAGTAATTCAAGAGGTTCAAAATCAATTGTGTCCAATGGTGAATGCTGGATTTTCATGTTCTAAAAGAGTGATTGTCGTTGGATATGCTCTTACTTCTAAAAAGATTAAGAGCTTTTTGCAACCTAAGCTTCAAGGTGTAGCTAGGAACAAGGGGATACTGTTTGTAGCTATTGACCATAATAGGCCTCTTTCAGATCAAGGTCCTTTTGATATTGTGTTGCATAAGTTATCAGGGAGAGAGTGGCGCCAGGTTCTTGAGGATTATAGGCAATCACACCCTGAAGTTACTGTTCTAGATCCTCCTGATGCCATACAACATTTACGCAATCGTCAATACATGCTTCAGGCTGTTGCGGAAATGAACCTCTCTGATTCTTATGGCAAAGTTGGTGTTCCTCGGCAGTTAGTTATCAAGAGGAATGCATCAACAATCCCAGAGTTGGTCAACAGAGCTGGCTTGACTTTACCCCTTGTTGCAAAGCCACTGGTTGCTGACGGAAGTGCAAAGTCCCATGAATTATCCCTTGCCTATGAGCAGTATTCCCTTCACAAACTCGAACCTCCTCTTGTTCTTCAGGAGTTTGTCAACCATGGAGGTGTTCTCTTTAAGGTTTATATAGTTGGTGATGCTATAAAGGTTGTCCGACGGTTTTCACTACCTGATGTTAACAAGTGGGAGCTTTCCAAAGATGCTGGCTTATATCATTTTCCTCGGGTATCTTGCGCTGCAGCTTCTGCAGATGATGCAGATCTGGACCCTGATGTTGCTGAGCTTCCTCCAAGACCTTTACTTGAGAAACTGGCTAAGGAACTTCGTTGGCGATTGGGTCTCCGGCTGTTCAACTTGGATATTATCCGTGAGTATGGAACTAGAGATCACTTTTATGTCATTGACATAAATTACTTCCCTGGATATGGTAAAATGCCAGAATATGAACACATATTTACTGACTTCTTGTTGAGCCTGAGGCAGGGGAAGTATAAGAAAAAATCCAGCTAG 1053 0.4255 MRLREELPFTNGEDEKDEVIQEVQNQLCPMVNAGFSCSKRVIVVGYALTSKKIKSFLQPKLQGVARNKGILFVAIDHNRPLSDQGPFDIVLHKLSGREWRQVLEDYRQSHPEVTVLDPPDAIQHLRNRQYMLQAVAEMNLSDSYGKVGVPRQLVIKRNASTIPELVNRAGLTLPLVAKPLVADGSAKSHELSLAYEQYSLHKLEPPLVLQEFVNHGGVLFKVYIVGDAIKVVRRFSLPDVNKWELSKDAGLYHFPRVSCAAASADDADLDPDVAELPPRPLLEKLAKELRWRLGLRLFNLDIIREYGTRDHFYVIDINYFPGYGKMPEYEHIFTDFLLSLRQGKYKKKSS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0341 350 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 43 122 IPR041429 -
Lal17g0341 350 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2 14 348 - -
Lal17g0341 350 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 14 348 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lal17g0341 350 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 142 338 IPR040464 -
Lal17g0341 350 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 118 324 - -
Lal17g0341 350 Gene3D - 118 322 - -
Lal17g0341 350 PIRSF ITPK 13 350 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0341 Lal-Chr17 2182049 2187377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0341 K00913 - gmx:100776901 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0341 17 2182049 2187377 Lal17g0341 17 2182049 2187377 ECH
Lal17g0341 17 2182049 2187377 Lal4g0301 4 1947644 1952736 LSH