Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0292 ATGGCATCTAGTAGTGAAGATGGCGATTCGAAGATGAAGATCGTTCATGGCGCGGCTGGTTATATTCTCGAAGACGTTCCTCACTTCACCGACTACATTCCCGATCTTCCTACGTATCCAAATCCGCTTCGATCTAATCCAGCTTACTCGGTTGTTAAGCAATATTTTGTGCACATGGACGACACCGTTCCACAGAAGGTTGTTGTTCACAAGGATGGTCCAAGAGGTGTCCATTTTCGACGTGCAGGACCTAGACAAAAGGTATATTTTAAGTCTGATGATGTGCGTGCATGTATTGTTACATGTGGTGGTCTCTGCCCTGGACTCAACACTGTCATAAGGGAAATTGTCTGTGGGCTTTCTTATATGTATGGTGTCAACAAAGTCCTTGGCATAGATGGTGGTTATAGGGGTTTTTATTCCAAGAACACAGTTACTTTAACCCCTAAGGTGGTCAATGACATACATAAGCGTGGGGGTACAATTCTTGGGACATCACGAGGTGGGCACGATACTGGCAAGATTGTTGACAGCATCCAGGATCGTGGAATTAATCAGGTTTATATTATTGGAGGTGATGGAACACAGAGAGGAGCGTCTGTGATTTATGAGGAAGTTAAACGGAGAGGTCTGAAAGTAGTAATTGCTGGAATTCCTAAAACCATAGATAATGACATCCCGGTGATTGACAAGTCCTTTGGTTTTGATACTGCGGTCGAGGAGGCTCAACGTGCCATTAATGCAGCACATGTTGAAGCTGAAAGTGTTGAGAATGGCATTGGTGTAGTAAAGCTAATGGGACGTTTTAGTGGTTTTATTGCAATGTATGCTACTCTTGCTAGTAGAGATGTGGACTGTTGCTTGATTCCAGAGTCATCCTTCTACCTTGAAGGAAAGTGTGGACTTTTCGAATTTATTGAAAAACGGCTGCAAGAAAATGGACATATGGTTATAGTCATAGCTGAGGGGGCAGGACAAGAACTTTTTACAGAACACTTGCAAGACATGAACCAGAAGGATGCTTCTGGAAACAAGCTACTTCAAGACGTTGGTCTATGGATATCTCATAGTATCAAGGATCATTTTGCAAGGACAAATAAGATGGCTATCACTCTTAAATATATAGATCCAACTTACATGATCCGTGCAATTCCTAGCAACGCATCAGACAATGTCTACTGCACACTTCTTGCTCAGAGTGCAGTTCATGGAGCAATGGCTGGGTATACTGGATTCACAAGTGGCCTGGTCAATGGCAGACAAACATATATTCCATTCAATAGAATCATTGAGAGGCAGAACAAGGTTGTGATTACTGACAGAATGTGGGCAAGACTCCTTTCTTCAACCAACCAGCCAAGCTTTTTGAACCCCAAAGATGTTGAAGAAGCAAAGAAAACAGAACTTCCCTCTCAGTTGTTAGAAGAGAACAATTGCAACAATCACGATGAGGCCCATAAATCAGGAAAAAAAGCTGAATAG 1482 0.4258 MASSSEDGDSKMKIVHGAAGYILEDVPHFTDYIPDLPTYPNPLRSNPAYSVVKQYFVHMDDTVPQKVVVHKDGPRGVHFRRAGPRQKVYFKSDDVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVLGIDGGYRGFYSKNTVTLTPKVVNDIHKRGGTILGTSRGGHDTGKIVDSIQDRGINQVYIIGGDGTQRGASVIYEEVKRRGLKVVIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESVENGIGVVKLMGRFSGFIAMYATLASRDVDCCLIPESSFYLEGKCGLFEFIEKRLQENGHMVIVIAEGAGQELFTEHLQDMNQKDASGNKLLQDVGLWISHSIKDHFARTNKMAITLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTSGLVNGRQTYIPFNRIIERQNKVVITDRMWARLLSSTNQPSFLNPKDVEEAKKTELPSQLLEENNCNNHDEAHKSGKKAE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0292 493 MobiDBLite consensus disorder prediction 479 493 - -
Lal4g0292 493 Pfam Phosphofructokinase 98 403 IPR000023 GO:0003872|GO:0006096
Lal4g0292 493 Gene3D - 92 281 - -
Lal4g0292 493 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 3 485 - -
Lal4g0292 493 PANTHER - 3 485 - -
Lal4g0292 493 Coils Coil 239 259 - -
Lal4g0292 493 PIRSF ATP_PFK_TP0108 1 460 IPR012004 GO:0003872|GO:0005524|GO:0006096
Lal4g0292 493 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 26 456 IPR012004 GO:0003872|GO:0005524|GO:0006096
Lal4g0292 493 MobiDBLite consensus disorder prediction 455 493 - -
Lal4g0292 493 SUPERFAMILY Phosphofructokinase 29 461 IPR035966 GO:0003872|GO:0006096
Lal4g0292 493 PRINTS ATP-dependent phosphofructokinase family signature 99 118 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal4g0292 493 PRINTS ATP-dependent phosphofructokinase family signature 183 199 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal4g0292 493 PRINTS ATP-dependent phosphofructokinase family signature 216 233 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal4g0292 493 PRINTS ATP-dependent phosphofructokinase family signature 234 252 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal4g0292 493 PRINTS ATP-dependent phosphofructokinase family signature 255 271 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal4g0292 493 PRINTS ATP-dependent phosphofructokinase family signature 312 324 IPR022953 GO:0003872|GO:0006002|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0292 Lal-Chr4 1907237 1914898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0292 K00850 - gmx:100803139 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0292 4 1907237 1914898 Lal4g0292 4 1907237 1914898 ECH
Lal21g0428 21 2963322 2970550 Lal4g0292 4 1907237 1914898 LSH