Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0428 ATGGCGTCGAGCGATAATGACAATTCGCAAATGAAGATCGTTAATGGCGAAGCTGGTTACATACTCGAAGATGTTCCACACTTCACAGACTATATCTCTAATCTCCCTACGTATCCGAATCCGCTACGATCTAATCCAGCTTACTCGGTTGCTAAGCAGTATTTTGTGAACGTGGACGACACCGTTCCACAGAAGGTTGTTGTTCACAAGGATAGTCCAAGAGGCGTCCATTTTCGACGTGCAGGACCTAGACAAAAGGTATATTTTAAGTCTGATGACGTGCAGGCCTGTATTGTTACGTGTGGTGGTCTCTGCCCTGGCCTCAACACTGTCATAAGGGAAATTGTCTGTGGGCTTTCTTACATGTATGGTGTCAACAAAGTCCTCGGCATTGATGGTGGTTATAGGGGTTTTTATTCGAAGAACACAGTTACTTTAACACCTAAGGTGGTCAATGACATCCATAAGCGTGGGGGTACGATTCTTGGGACATCACGAGGAGGGCATGACACTGGCAAGATTGTTGACAGCATCCAGGATCGCGGAATCAATCAGGTTTATATTATTGGAGGTGATGGAACACTGAGAGGAGCATCTGTGATTTATGAGGAAGTTAAAAGGCGGGGTCTGAAAGTAGTAATTGCTGGAATTCCTAAAACAATTGATAATGACATCCCGGTGATTGACAAGTCCTTTGGTTTTGATTCTGCGGTTGAGGAGGCTCAACGTGCTATTAATGCTGCACATGTTGAAGCTGAAAGTGTTGAGAATGGCATTGGTGTTGTAAAGCTAATGGGACGTTATAGTGGTTTTATTGCATTGCATGCTACTCTTGCTAGTAGGGATGTGGACTGTTGCTTGATTCCAGAGTCACCCTTCTACCTTGAAGGAAAGGGTGGACTTTTTGAATTTATTGAAAAAAGGCTGAGAGAAAATGAACATATGGTTATAGTCATAGCTGAGGGAGCAGGACAAGATCTGTTCACAGAACACATGCAAGACATGAACCAGAAGGATGCTTCTGGAAACAAGCAACTTCAGGATGTTGGTCTATGGATATCCCATAGGATCAAGGATCATTTTGCAAGGACAAATAAGATGTCCATCACTCTTAAATATATAGATCCAACTTACATGGTCCGGGCAATTCCTAGCAATGCATCGGACAATGTCTACTGCACACTTCTTGCTCAGAGTGCAGTTCATGGAGCAATGGCTGGGTATACTGGATTTACAAGTGGGCTAGTCAATGGCAGACATACTTATATTCCATTTAACAGGATAACTGAGAGGCAGAACAAGGTCGTGATCACGGACAGAATGTGGGCAAGACTCCTTTCGTCAACCAACCAGCCAAGTTTTCTGAACCCCAAGGTTGTTGAAGAAGCCAAAAAAACAGAACAACCTCCCACTCGGTTGTTAAAAGAGGAAAAATGCAAAAATCTTGATGAAGTTAAAGCAGAAACTCCCTCTCAGTTATTAGAAGAGGACAATTGCAAAGACAAATCAGGAAACAACGCTGACCAGAGTATCAAGACAGAAAATTAG 1548 0.4315 MASSDNDNSQMKIVNGEAGYILEDVPHFTDYISNLPTYPNPLRSNPAYSVAKQYFVNVDDTVPQKVVVHKDSPRGVHFRRAGPRQKVYFKSDDVQACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVLGIDGGYRGFYSKNTVTLTPKVVNDIHKRGGTILGTSRGGHDTGKIVDSIQDRGINQVYIIGGDGTLRGASVIYEEVKRRGLKVVIAGIPKTIDNDIPVIDKSFGFDSAVEEAQRAINAAHVEAESVENGIGVVKLMGRYSGFIALHATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLRENEHMVIVIAEGAGQDLFTEHMQDMNQKDASGNKQLQDVGLWISHRIKDHFARTNKMSITLKYIDPTYMVRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTSGLVNGRHTYIPFNRITERQNKVVITDRMWARLLSSTNQPSFLNPKVVEEAKKTEQPPTRLLKEEKCKNLDEVKAETPSQLLEEDNCKDKSGNNADQSIKTEN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0428 515 Coils Coil 238 258 - -
Lal21g0428 515 PANTHER - 4 484 - -
Lal21g0428 515 Gene3D - 91 280 - -
Lal21g0428 515 PRINTS ATP-dependent phosphofructokinase family signature 98 117 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal21g0428 515 PRINTS ATP-dependent phosphofructokinase family signature 182 198 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal21g0428 515 PRINTS ATP-dependent phosphofructokinase family signature 215 232 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal21g0428 515 PRINTS ATP-dependent phosphofructokinase family signature 233 251 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal21g0428 515 PRINTS ATP-dependent phosphofructokinase family signature 254 270 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal21g0428 515 PRINTS ATP-dependent phosphofructokinase family signature 311 323 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lal21g0428 515 Pfam Phosphofructokinase 97 402 IPR000023 GO:0003872|GO:0006096
Lal21g0428 515 MobiDBLite consensus disorder prediction 484 515 - -
Lal21g0428 515 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 4 484 - -
Lal21g0428 515 MobiDBLite consensus disorder prediction 484 503 - -
Lal21g0428 515 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 25 455 IPR012004 GO:0003872|GO:0005524|GO:0006096
Lal21g0428 515 SUPERFAMILY Phosphofructokinase 29 461 IPR035966 GO:0003872|GO:0006096
Lal21g0428 515 PIRSF ATP_PFK_TP0108 1 459 IPR012004 GO:0003872|GO:0005524|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0428 Lal-Chr21 2963322 2970550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0428 K00850 - gmx:100818755 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0428 21 2963322 2970550 Lal4g0292 4 1907237 1914898 LSH