Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0277 ATGGTGAATCCGTTGGTGGCGCGTGCCACGAGCGACATGCTCATCGGTCCTGACTGGGCTTTGAATATCGAGATCTGTGACGTACTCAACCGTGACCCTGGGCAAGCCAAGGATGTTGTAAAGGGTATAAAGAAGCGGATTGGAAGTAGAAATTCTAAAAATCAACTTCTTGCACTAACTCTTCTGGAGACTATCATAAAAAATTGTGGGGACATTGTTCACATGCATGTTGCAGAGAGAGATGTTCTTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCTGATCCTCATGTTAGAGAGAAGATACTGATTCTAATTGATACATGGCAAGAAGCTTTTGGAGGGCCAAGGGCAAGATATCCACAGTATTACGCTGCATACAAGGAACTGTTGCGGGCTGGGGCAGTATTCCCTCAAAGGTCTGAGCAATCTGCACCTATATTCACACCGCTACAAACACATCCATTGGCATCATACCCTCAAAATATACGCGACCCTGATGCTCGTCAGGACACAGCTGAATCCTCCATGGAGTCTGAGTTTCCAACCCTAAGTTTGACTGAAATTCAGAATGCACGTGGTATTATGGATGTTCTTTCTGAAATGCTCAATGCCATAGATCCTGGTAATAAAGAAGGACTTAATCAGGAGGTTATTGTTGATTTGGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTACACCTTGTTAACTCAACTACGGATGAGTCACTGCTATGTGACGGACTTTCTCTGAATGATGATCTGCAGCGTCTACTGGCCAAGCATGAATCCATTGCTTCAGGAACTTCTACTCAAAATCACACGGAGAAACCGAAGCCTGGACCTGCTGGAGCACTTGTAGATGTTGATAGTCCTTTGGTTGATACTGGAAATACTAGTAATCAAACTCATCGATCCTCTTCGGGTGCTGAAGCAGGGTCCCAAACATTGAATCAGTTATTGCTTCCTGCACCCCTCACATCAAATGGTCCAGCTCTCCCTGCAAAGGTTGATCCCAAATTGGACCTGCTCAGTGGCGAAGACTATAACTCACCAAAAGCAGAGACTTCACTTGCTCTTGTTCGTGTAGGAGAACAACAGCCGGCCAGTCCTATGTCCCAGCAGAATGCTCTTGTACTTTTTGATATGTTTTCTAATGGTAGCAATTCATCAACTTCTGTCAATGCCCAGCCAACTAATGTTGCTGGCCAAACCAGTCCATTAGGCCCTCAATTTCAACAACAGCAGACTTTCATATCTCAAGGTGCACTTTACCCCAATGGAAGTGTGCCAAATGGTGGATCACCTCGGTACGAGCAATCAGCATATACACAAAGCACGGATGCTGCCTGGAATGGTCAGGCTGCACAACAGCAACAGCCACCTTCACCAGTTTATGGTACACCAAATGTTGGATCATTGCCGCTGCCTCCCTGGGAAGCTCAACCGACAGACAATGATAATTCAATCGCAGGCACTCGATATCCACAACCACTGCCAGCCACTCAAATGGTACAGAATGCTGCATATCCTCAGGGACCTCAAGCAATGGGAAATAGCAATGCTGTTAGTATGTATATGCAACCAAATGTTAACCATGTTGGTCAAAGCAATCAAGCAGGCTTGCAGGCGCATTATGTTCAGGGTGTTGCAGGTCCCAATATGGGAATGGTTCCACATCATATGCAAAATGTTCCTGCGGCGTCCATGTATCCAGTACAAATGTATGGCAATCAATTCACAGGATATGGCTATGGTCAGCAACAAGGAGTTCAATATGTTGAGCAGCAAATGTATGATCTAACTATGAGAGATGATAGTGGTATGAGAAACTCTCACCAGGTTTCTGCTGCATCTTATGCGCCATCTGGGAAGCCTTCCAAACCCGAGGATAATTTATTTGGGGACCTTGTTAACATGGCAAAAGTGAAGCCAAAAGCCCCTCCTGGCCAAGCTGGTAGCATGTAG 1971 0.4551 MVNPLVARATSDMLIGPDWALNIEICDVLNRDPGQAKDVVKGIKKRIGSRNSKNQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDPHVREKILILIDTWQEAFGGPRARYPQYYAAYKELLRAGAVFPQRSEQSAPIFTPLQTHPLASYPQNIRDPDARQDTAESSMESEFPTLSLTEIQNARGIMDVLSEMLNAIDPGNKEGLNQEVIVDLVEQCRTYKQRVVHLVNSTTDESLLCDGLSLNDDLQRLLAKHESIASGTSTQNHTEKPKPGPAGALVDVDSPLVDTGNTSNQTHRSSSGAEAGSQTLNQLLLPAPLTSNGPALPAKVDPKLDLLSGEDYNSPKAETSLALVRVGEQQPASPMSQQNALVLFDMFSNGSNSSTSVNAQPTNVAGQTSPLGPQFQQQQTFISQGALYPNGSVPNGGSPRYEQSAYTQSTDAAWNGQAAQQQQPPSPVYGTPNVGSLPLPPWEAQPTDNDNSIAGTRYPQPLPATQMVQNAAYPQGPQAMGNSNAVSMYMQPNVNHVGQSNQAGLQAHYVQGVAGPNMGMVPHHMQNVPAASMYPVQMYGNQFTGYGYGQQQGVQYVEQQMYDLTMRDDSGMRNSHQVSAASYAPSGKPSKPEDNLFGDLVNMAKVKPKAPPGQAGSM 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0277 656 MobiDBLite consensus disorder prediction 424 468 - -
Lal4g0277 656 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Lal4g0277 656 SUPERFAMILY GAT-like domain 141 269 - -
Lal4g0277 656 MobiDBLite consensus disorder prediction 266 314 - -
Lal4g0277 656 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Lal4g0277 656 CDD VHS 2 132 - -
Lal4g0277 656 CDD GAT_GGA_like_plant 188 266 - -
Lal4g0277 656 Gene3D - 181 275 IPR038425 -
Lal4g0277 656 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Lal4g0277 656 MobiDBLite consensus disorder prediction 158 181 - -
Lal4g0277 656 MobiDBLite consensus disorder prediction 294 314 - -
Lal4g0277 656 MobiDBLite consensus disorder prediction 607 656 - -
Lal4g0277 656 SUPERFAMILY ENTH/VHS domain 4 138 IPR008942 -
Lal4g0277 656 Gene3D - 1 148 IPR008942 -
Lal4g0277 656 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Lal4g0277 656 Pfam VHS domain 5 128 IPR002014 GO:0035091|GO:0043130
Lal4g0277 656 PANTHER TARGET OF MYB PROTEIN 1 1 648 - -
Lal4g0277 656 PANTHER TOM1-LIKE PROTEIN 1 648 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0277 Lal-Chr4 1777657 1787600 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0277 - - lang:109328367 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0277 4 1777657 1787600 Lal4g0277 4 1777657 1787600 ECH
Lal21g0408 21 2829808 2837569 Lal4g0277 4 1777657 1787600 LSH