Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0408 ATGGTGAATCCGTTGGTGGCTCGTGCTACGAGCGACATGCTCATCGGTCCTGATTGGGCTTTGAACATTGAGATCTGTGACATACTCAATCGTGACCCTGGGCAAGCAAAGGATGTTGTAAAAGGTATAAAGAAGCGGATTGGGAGTAGAAATTCTAAAAGTCAACTTCTTGCACTAACTCTGCTGGAGACTATCATAAAGAATTGTGGGGACATTGTTCACATGCATGTTGCAGAGAGAGATATTCTTCATGAGATGGTGAAAATAGTTAAGAAGAAGCCTGATTCTCATGTTAGAGAGAAGATACTGATTCTAATAGATACATGGCAAGAAGCTTTTGGAGGGGCAAGGGCAAGATATCCACAGTATTATGCTGCATACCAGGAACTGTTGCGTGCTGGGGCAGTATTCCCTCAAAGGTCCGAGTCATCTGCACCTGTATTCACACCACTACAAACACATCCATTGGCATCATACCCTCAAAATGTACGTTACTCTGACGCTTCTCAGGGCACAGCTGAGTCCTCTGCAGAGTCAGAGTTTCCAACCCTAAGTTTGACTGAAATTCAGAATGCACGTGGTATTATGGATGTTCTTTCTGAAATGCTCAATGCGATAGATCCTGGTAATAAAGAAGGGCTTAGTCAGGAGGTTATTGTTGATTTGGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTACACCTCGTTAACTCAACTACGGACGAATCACTGCTATGTCAAGGACTTTCTCTAAATGATGATTTGCAGCGTCTATTAGCCAAGCATGAATCCATTTCCTCAGGAACTTCTGCTCAAAATCACACTGAGAAACCGAAGACTGAACCTTCTGGAGCACTTGTAGATGTTGATGGTCCTTTGGTTGATACTGGAAATACTAGTAATCAAACTCATGGATCCTCTTCTAGTGCTGAAGCAGGGTCCCAAACATTGAATCAGTTATTGCTACCTGCACCCCCCACATCAAATGGTTCAGCTCTCCCTGCAAAGATTGATCCCAAATGGGACCTTCTCAGTGGTGATGACTACAACTCACCAAAAACAGAGAATTCACTTGCTCTTGTACCTGTAGGAGAACAGCAGCCAGCCAGTCCAATGTCTCAACAGAATGCTCTTGTACTTTTTGATATGTTTTCTAATAGTAGCAATGCATCAACTTCTGTCAATGCTCAGCCAACTAATGTTGCTGGCCAAACCAATCAATTAGGCCCCCAATTTCAACAACAGCAAAATTTCATATCTCAAAGTGCACTTTACCCCAATGGAAATGTGCCAAATGGGGGCTCACCTCGGTACGAGCATTCACCATATACACAAAGCAGAGATCCTGGATGGAATGGTCAGGCTGCGCAGCAGCAACAACCACCTTCACCAGTTTATGGTGCATATATGCTTCTTTGGCTCAAATCCTTTCACAACTACATTCTCTTCATTTTAAAAATACTGCTTTTTATGTTGGCTATTCATAAGTCGTCAATATTTTCTTTCCCACTGACCAGCACTGATTTGCTGGGTGCACCAAGTATTGGATCATTGCCGCTGCCTCCCTGGGAAGCTCAACCCACAGACAATGGTAGTCCAGTAGCAGGCACTCAATATCCACAACCACTGCAAGCCTCTCAAATGGCACAGAATGCTGCTTATCCCCAGGGACCTCAAGCAATGGGAAATGACCACGCCGTTGGTATGTACATGCAGCCAAATGCTAACAGCCATTTGTCAACAAACAATAACTATATTGGTCAAAGCAATCAAGTGGGCATGCACCCACAGTATATTCAGGGTGCTGCAGGTCCCTATGTGGGAATGGTTCCACATCAAATGCAAAATGGTTCTTCGGCGTCCATGTATCCACAACAGATGTATGCCAACCAATTCACAGGATATGGCTATGGTCAGCAACAAGGGGTTCAATATGTTGAGCAGCAAATGTATGGTCTATCTATGAGAGATGATAGTGGTCTGAGAAATTCTCATCAGGTTTCTGCTGCATCTTATGTGCCATCTGGGAAGCCTTCCAAGCCAGAGGATAATTTATTTGGAGACCTTGTTAACATGGCAAAAGTGAAGCCAAAATCTCCTCCTGGCCGAGCCGGTAGCATGTAG 2127 0.4424 MVNPLVARATSDMLIGPDWALNIEICDILNRDPGQAKDVVKGIKKRIGSRNSKSQLLALTLLETIIKNCGDIVHMHVAERDILHEMVKIVKKKPDSHVREKILILIDTWQEAFGGARARYPQYYAAYQELLRAGAVFPQRSESSAPVFTPLQTHPLASYPQNVRYSDASQGTAESSAESEFPTLSLTEIQNARGIMDVLSEMLNAIDPGNKEGLSQEVIVDLVEQCRTYKQRVVHLVNSTTDESLLCQGLSLNDDLQRLLAKHESISSGTSAQNHTEKPKTEPSGALVDVDGPLVDTGNTSNQTHGSSSSAEAGSQTLNQLLLPAPPTSNGSALPAKIDPKWDLLSGDDYNSPKTENSLALVPVGEQQPASPMSQQNALVLFDMFSNSSNASTSVNAQPTNVAGQTNQLGPQFQQQQNFISQSALYPNGNVPNGGSPRYEHSPYTQSRDPGWNGQAAQQQQPPSPVYGAYMLLWLKSFHNYILFILKILLFMLAIHKSSIFSFPLTSTDLLGAPSIGSLPLPPWEAQPTDNGSPVAGTQYPQPLQASQMAQNAAYPQGPQAMGNDHAVGMYMQPNANSHLSTNNNYIGQSNQVGMHPQYIQGAAGPYVGMVPHQMQNGSSASMYPQQMYANQFTGYGYGQQQGVQYVEQQMYGLSMRDDSGLRNSHQVSAASYVPSGKPSKPEDNLFGDLVNMAKVKPKSPPGRAGSM 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0408 708 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Lal21g0408 708 MobiDBLite consensus disorder prediction 266 280 - -
Lal21g0408 708 MobiDBLite consensus disorder prediction 266 314 - -
Lal21g0408 708 MobiDBLite consensus disorder prediction 295 314 - -
Lal21g0408 708 Pfam VHS domain 5 130 IPR002014 GO:0035091|GO:0043130
Lal21g0408 708 CDD VHS 2 132 - -
Lal21g0408 708 CDD GAT_GGA_like_plant 188 266 - -
Lal21g0408 708 SUPERFAMILY GAT-like domain 141 269 - -
Lal21g0408 708 Gene3D - 183 275 IPR038425 -
Lal21g0408 708 SUPERFAMILY ENTH/VHS domain 4 138 IPR008942 -
Lal21g0408 708 PANTHER TARGET OF MYB PROTEIN 1-LIKE ISOFORM X1 1 707 - -
Lal21g0408 708 Gene3D - 1 148 IPR008942 -
Lal21g0408 708 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Lal21g0408 708 MobiDBLite consensus disorder prediction 439 460 - -
Lal21g0408 708 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Lal21g0408 708 PANTHER TOM1-LIKE PROTEIN 1 707 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lal21g0408 708 MobiDBLite consensus disorder prediction 424 460 - -
Lal21g0408 708 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0408 Lal-Chr21 2829808 2837569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0408 - - lang:109328367 1102.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0408 21 2829808 2837569 Lal21g0408 21 2829808 2837569 ECH
Lal21g0408 21 2829808 2837569 Lal4g0277 4 1777657 1787600 LSH