Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0213 ATGCAGAGACGGAGTTCTCCGAAGCATAGACATGATGGAACTTCGCCACTTCCTCTCGGCATGGATTGGAGTCCTGCACCTCGCAAATGGAATGGGAGGGATACAGTATGGCCGCACAATCATCGAAGCGGTTGGAGTTATTGTGTTACAATACCTTCATGGGTCTTCCTTCCAAAATCAAAGAATTCAGATCCTGTAGTGGGACAGTTCTACAGGGTTCAAGTTGGCATACAGTCGCCAGAAGGGGTTACAACGCTGCACAGTGTACTAAGAAGGTTCAATGATTTTCTAAAGTTATTTGCTGATCTTAAAAAGGAGTTTCCAAGGAAAAATATTCCTCCGGCACCACCCAAGGGACTCATGCGATTGAAAAGCCGAGCTTTGTTGGAAGAGAGAAGGTGCTCTTTGGAGGAATGGATGACAAAACTATTGTCTGACATTGATATATCAAGATGTGCTGCAGTGGCATCATTTCTCGGACTAGAAGCTGCTGCTAGATCTTCATTTCAAGATGCAAGCCAGCAGAATTCAGAGACAGATCATGATTCCAATACCATAGCTTATTCAGTGCAGCCACCTCTTCATTCAAGCTTATCATTAGTTGTTGGCAGTTCATCTGTTGCCTCAGATTATGGTAGTGATACTGTGTATGAGCCTTCTGAACTGGGAACTCCAAGAATTGGACAGGATGACAATTCTGAAGCTGGCACAGATGATCTAACATTGGATGAAGATATGACAAATCCAGTGGAAAGGCTTGTGAAATATGACATATCAAACATCAATGAGGGTTTGTTTATTGGTCAGACTATTCTAGACCAATTGGAAGGCCTTCCTAGGCATAAAGTAAATGCCAGACATGACAACTATGTTACAGAGAAGGGCAAAAGTAATGGTAATTCTTATAATTCTTCACCTTTAGCTAATAATTCCGTAGAGCTTTACTCTGAGCATGAGCATGCTAAGGCTGTTGATCATGATCGTGTGCTTTCAAATGAGAGTGTTGGAAGTGAAGGAAGCTCGATACGTGGCAGTGACGTGTCTAATTCTTGGATTCCAAATTCATATGGTGATGGCTCTCTCGACCTTCCTGGAGGTGCTTTGGTTCCAAGAGTAACAGATATTATGAACCACATGGAGTTGCAGTTTACCGGTGATGCTCAAATAGTCCTCCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTTAACTATGCAGCGAAGGCTAGTCACTTCAAAAAATGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAGCTGCAAAGGATTTTCTGGCAACAAAGGTCAAGGATTTGGAAGTAGAACTTGAAGCTACCAAACAGAAAAGTAAGGAGAACTTGCAGCAAGCTGTTCTGATTGAGAGGGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGTACTTCGACAAAAGTCACTGGAATTGGAGATGAAACTAAAGTCTGAAGCGGGTGGAAATTCAAGTCAGAATTCCACAAAGGAGTCAATTGTTCAGCCGAAAGATGTATTGTTGCAGAATTTAAACGCAACTAAAGAGCAGCTAGAAATTTTATCAAAACAGTATGGAGAGCTAGAAGCGAAATCCAAAGCAGATATTAAAGTTTTGGTTAAAGAGGTCAAATCTCTCCGTAATACACAAAAGGAGTTAAAGAACGAGCTTAGTGAGTCGGTGAAGGAGAAGTGTGAAGCTGAGGAATTTCTTCAACACGAAAGAGAAAAGCGGGAGCAGGCCGAAACTGCTTGTAGAAACTTGCTGCAGAAATGCAAGCTTCTTTTCAACCAGCTTCAAGAGTGCAATGTCAATCTTCCCCCTGAAGACAAATATAGGAAAAACATGAATTCATCATCATTAACTGATACTTTCAATCAATTAGCAAAATCTGATGACCAAATTAACATCTTACTGGAGGAGGTTGAAAACTTAGGGAAGGAATATGTATATGCTGCTTCTAATGTAGATAAAACCAATGACATCAATGGAGGTGTGATTTGTGATGATGAATTGACAAAGTTCTTAGCAGATTTGTTCATCTACAATGTTAGACTGAGAAAACAGACAAACAACATCACATGGCATGCTCTCAAATCGGACATGAGAGCAAGTGATGATTCTACTTCGATGGAAACTGTAACAAGTGTTTAG 2169 0.4071 MQRRSSPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHNHRSGWSYCVTIPSWVFLPKSKNSDPVVGQFYRVQVGIQSPEGVTTLHSVLRRFNDFLKLFADLKKEFPRKNIPPAPPKGLMRLKSRALLEERRCSLEEWMTKLLSDIDISRCAAVASFLGLEAAARSSFQDASQQNSETDHDSNTIAYSVQPPLHSSLSLVVGSSSVASDYGSDTVYEPSELGTPRIGQDDNSEAGTDDLTLDEDMTNPVERLVKYDISNINEGLFIGQTILDQLEGLPRHKVNARHDNYVTEKGKSNGNSYNSSPLANNSVELYSEHEHAKAVDHDRVLSNESVGSEGSSIRGSDVSNSWIPNSYGDGSLDLPGGALVPRVTDIMNHMELQFTGDAQIVLPLDQRNKLNRILLTMQRRLVTSKNDMEDLIVRLNQEIAAKDFLATKVKDLEVELEATKQKSKENLQQAVLIERERFTQMQWDMEVLRQKSLELEMKLKSEAGGNSSQNSTKESIVQPKDVLLQNLNATKEQLEILSKQYGELEAKSKADIKVLVKEVKSLRNTQKELKNELSESVKEKCEAEEFLQHEREKREQAETACRNLLQKCKLLFNQLQECNVNLPPEDKYRKNMNSSSLTDTFNQLAKSDDQINILLEEVENLGKEYVYAASNVDKTNDINGGVICDDELTKFLADLFIYNVRLRKQTNNITWHALKSDMRASDDSTSMETVTSV 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0213 722 ProSiteProfiles PX domain profile. 49 166 IPR001683 GO:0035091
Lal4g0213 722 SMART PX_2 55 162 IPR001683 GO:0035091
Lal4g0213 722 MobiDBLite consensus disorder prediction 212 242 - -
Lal4g0213 722 Coils Coil 633 653 - -
Lal4g0213 722 Coils Coil 576 603 - -
Lal4g0213 722 Coils Coil 541 568 - -
Lal4g0213 722 MobiDBLite consensus disorder prediction 1 24 - -
Lal4g0213 722 Coils Coil 509 536 - -
Lal4g0213 722 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 717 IPR044588 GO:0015031
Lal4g0213 722 Gene3D - 61 189 IPR036871 GO:0035091
Lal4g0213 722 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 717 - -
Lal4g0213 722 SUPERFAMILY PX domain 41 162 IPR036871 GO:0035091
Lal4g0213 722 Coils Coil 431 458 - -
Lal4g0213 722 Pfam PX domain 87 159 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0213 Lal-Chr4 1330039 1336803 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0213 - - gmx:100792151 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0213 4 1330039 1336803 Lal4g0213 4 1330039 1336803 ECH
Lal21g0329 21 2194473 2200698 Lal4g0213 4 1330039 1336803 ECH
Lal21g0329 21 2194473 2200698 Lal4g0213 4 1330039 1336803 LSH