Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0329 ATGCAGAGACGGAGTCCTCCAAAACACAGGCACGATGGGACTTCGCCACTGCCTCTTGGCATGGATTGGAGTCCTGCGCCTCGAAAATTGGATGGGAAGGATACAGTATGGCCACACAATCATCGAAGCGGTTGGAGTTATTGTGTTACAATACCTTCTTGGGTTTTCATTCCAAAATCAAAGAATTCAGATCCTATAGTGGGACAGTTCTACAGGGTTCAAGTTGGTATACAGTCACCAGAAGGGGTCACAACGCTGCATGGTGTACTAAGAAGGTTCAATGATTTTATTAAGTTATTTACCGATCTTAAAAAGGAATTTTCCAGGAAAAATGTCCCTCCGGCACCACCCAAGGGACTCATGCGATTGAAAAGCCGAACTTTGTTGGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATGACAAAATTGTTGTCTGATATTGATATGTCAAGATGTGCTGCTGTAGCATCATTTCTTGGACTAGAAGTTGCTGCTAGATCTTCATTCCAAGTTTCAAGCCATCAGAATTCAGAGACAGATCCTGATTCCAGTAACAGAGCTTATTCAGTGCAGTTACCTCATCATTCGAGCTTATCATTAGTTGCTGGCAGTTCATCTGTTGCCTCAGATTATGGTAGTGATACTGCATATGAGCCATCTGAATTAGGAACTCCAACGATTGGACGGGATGACAATTCTGAAGTTGGAACAGATGATCTAACATTAGATGAACATATGACAAATCCAATGGAAAAGCTTGTGAAATATGGCATATCAAACATCGATGAGGGTTTGTTTATGAGTCAGACAATTCTAGACCAATTGGAAGGCCTTCCTAGGCATAAAGTAAATGCCAGACGTGACAACTATGTTACAGGGAAGGGCAAAAGTAATGGTAATTCATATAATTCTTCACTTTTAGCTGATAATTCCTTGGAGCTTTTGTCTGAGCTTGAGCATGCTAAGGCTATTGATTTTGCGCACATTCTTTCAAATGAGAGTTTTGGAAGTGAAGGAAGCTCGATACGTGGTAGTGACATGTCTAATTCTTGGGTTCCAAATTCATCTGGTGATGTCTCTCCTGGAGGTGCTTTGGTTCCAAGAGCAACGGATATTATGAACCATGCAGAGTTGCAGTTTACCGGTGATGCTCAAGTAGTCCTTCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTTAACTATGCAGCGAAGGCTAGTCACTTCAAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAGCTGCAAAGGATTTTCTTGCAACAAAGGTCAAGGATTTGGAAGTAGAACTTGAAGCTAACAAACAGAAAAGTAAAGAGAATTTGCAGCAAGCTATTCTGATTGAGAGGGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTCGACGAAAGTCATTGGAAATGGAGATGAAACTAAAGTCTGAAATGGGTGGAATCTCAAGTCAGAATTCCACAAAGGAGTCATTGGTTCAGCCAAAAGATGTGTTGCATAATTTAAATGCAAATAAAGAGCAACTGGAAGTTTTGTCAAAACAGTATGGAGAGCTAGAAGCAAAATCCAAAGCAGACATTAAAGTTCTGGTTAAAGAGGTCAAATCCCTCCGTAATACACAAAAGGAGTTAAAGAAGGAGCTTAGTGAGTCGGTGAAGGAGATGTGTGAGCGAGAGAAACTTCTTCAACATGAAAGGGAAAAGAGGGTGCAGGCAGAAACTGCTTGGAGAAACTTGGTGCCGAAATGCAGGCTTCTTTTCAACCAGCTCCAAGAGTGCAATGCCAATTTTTCTATTGAAGATGAAGATAGGAAGATCTTGAATTCGTCATCATTAACTGATACTTTTAATCAATTAGCAATATCTGATGACCAAATTGGCATTTTACTGGAAGAGGTAGAAAACTTACAACAGGACTATGGAAGTGCTGCTTCCAATGTAGATAAAAGCAGTGACATAAAATGTGGTCGAATCTGTGATGATGATTTGACAAAGATCATAGCAGATCTGTTCATGGACAATGTTAGATTGAGAAAACAGACGAACCGCATTACACGACATGCTCTAAAAACTTACATGACAGCAAGTGATGATTCTCCTTGA 2133 0.4041 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKLDGKDTVWPHNHRSGWSYCVTIPSWVFIPKSKNSDPIVGQFYRVQVGIQSPEGVTTLHGVLRRFNDFIKLFTDLKKEFSRKNVPPAPPKGLMRLKSRTLLEERRCSLEEWMTKLLSDIDMSRCAAVASFLGLEVAARSSFQVSSHQNSETDPDSSNRAYSVQLPHHSSLSLVAGSSSVASDYGSDTAYEPSELGTPTIGRDDNSEVGTDDLTLDEHMTNPMEKLVKYGISNIDEGLFMSQTILDQLEGLPRHKVNARRDNYVTGKGKSNGNSYNSSLLADNSLELLSELEHAKAIDFAHILSNESFGSEGSSIRGSDMSNSWVPNSSGDVSPGGALVPRATDIMNHAELQFTGDAQVVLPLDQRNKLNRILLTMQRRLVTSKTDMEDLIVRLNQEIAAKDFLATKVKDLEVELEANKQKSKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSEMGGISSQNSTKESLVQPKDVLHNLNANKEQLEVLSKQYGELEAKSKADIKVLVKEVKSLRNTQKELKKELSESVKEMCEREKLLQHEREKRVQAETAWRNLVPKCRLLFNQLQECNANFSIEDEDRKILNSSSLTDTFNQLAISDDQIGILLEEVENLQQDYGSAASNVDKSSDIKCGRICDDDLTKIIADLFMDNVRLRKQTNRITRHALKTYMTASDDSP 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0329 710 Coils Coil 537 564 - -
Lal21g0329 710 MobiDBLite consensus disorder prediction 1 25 - -
Lal21g0329 710 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 707 - -
Lal21g0329 710 Coils Coil 512 532 - -
Lal21g0329 710 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 707 IPR044588 GO:0015031
Lal21g0329 710 Coils Coil 428 455 - -
Lal21g0329 710 Pfam PX domain 89 159 IPR001683 GO:0035091
Lal21g0329 710 Gene3D - 59 188 IPR036871 GO:0035091
Lal21g0329 710 ProSiteProfiles PX domain profile. 49 166 IPR001683 GO:0035091
Lal21g0329 710 SMART PX_2 55 162 IPR001683 GO:0035091
Lal21g0329 710 MobiDBLite consensus disorder prediction 209 239 - -
Lal21g0329 710 SUPERFAMILY PX domain 41 161 IPR036871 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0329 Lal-Chr21 2194473 2200698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0329 - - gmx:100792151 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0329 21 2194473 2200698 Lal21g0329 21 2194473 2200698 ECH
Lal21g0329 21 2194473 2200698 Lal4g0213 4 1330039 1336803 ECH
Lal21g0329 21 2194473 2200698 Lal4g0213 4 1330039 1336803 LSH