Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0197 ATGGCGTTTTGGAGATCTATCGCTTTCTCTGCACTTCTTCTTCTTCTCATCCATGGCGCTCACTGCTTCTACCTCCCTGGTGTCGCACCACAAGATTTCCAAAAGGGAGATTTATTGCAAGTGAAAGTAAACAAATTAACATCAGTGAAGACCCAGCTTCCGTACACATATTATTCACTCCCTTATTGTAGCCCAGCAAAGATACAGGATAGTGCAGAAAACCTTGGGGAAGTGCTTCGTGGTGACCGCATTGAAAATTCTCTTTATGCGTTTAAAATGCGTGAGCCACAATTGTGCAATGTTGTGTGCAATCGTAAACTTGATGCTAAATCCGCGAAGGAGTTCAAAGAGAAAATCAATGATGAGTATCGTGTGAACATGATACTAGATAATCTTCCTCTAGTTGTTCCTATAAAAAGGAGTGATATGGATTCTACTGTTTATCAGCTTGGTTTCCACGTTGGACTCAAGGGGCAGTATAGCGGGAGCAAGGAGGAAAAGTTTTTTATTCACAACCATTTGGCATTTACTGTCAAGTATCATAGAGATATGCAAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTTAAGCCGTTCAGTGTAAAACATGAATATGAAGGTAAATGGGATGAAAAGACCCGTTTGACAACGTGTGACCCTCATGCTAAACACACAGTTGTCAACTCTAACACTCCCCAAGAGGTTGAAGAGAACCAGGAAATTATCTTCACTTATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGACGACCAAATTCACTGGTTCTCAATTGTGAACTCATTAATGATTGTTCTCTTCCTTTCCGGCATGGTAGCAATGATAATGCTGCGAACACTGTACCGTGACATTTCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCCCAAGAAGAGACTGGTTGGAAGCTTGTCCATGGTGATGTGTTTAGGCCCCCTCAGAACTCAGACCTTCTCTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGGATGATACTGGTAACCATGATATTCGCCATGCTTGGGTTCCTTTCTCCTTCAAACCGAGGTGGGCTGATGACAGCCATGCTCTTGCTTTGGGTCTTCATGGGACTTTTTGCTGGTTATGCCTCAACTCGCTTATACAAAATGTTCAAAGGATCAGAGTGGAAGAAAATTGCCCTCAGGACTGCAATCTTGTTCCCTGCTTCCGTTTCTGCCATTTTCGCTGTATTAAACACTTTAATATGGGGCCAAAAGTCATCTGGAGCTGTGCCATTTGGTACGATGTTCGCTCTGATCTTTTTATGGTTTGGGATTTCAGTTCCACTTGTTTTTGTGGGTAGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAGTCCAGTGAAGACAAACAAAATCCCAAGACAGATCCCTGAGCAGGCCTGGTACATGAATTCAGCCTTCTCAGTTCTGATTGGTGGAATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATACTCACTTCAATCTGGCTGAATCAGTTTTACTACATCTTCGGATTCCTCTTCCTAGTCTTCATCATCCTCATTATCACATGTGCTGAGATTACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTATGGTGGTGGCGGTCATACCTCACCTCTGGTTCTTCTGCACTTTACCTATTTCTTTATGCAACATTTTACTTCTTCACCAAGCTTGAAATCACGAAGTTGGTATCTGCGATATTATACTTCGGGTACATGCTTATAGCTTCTTATTCGTTCTTCGTGGTGACCGGTACTATTGGATTTTATGCATGCTTTTGGTTCACAAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1908 0.4224 MAFWRSIAFSALLLLLIHGAHCFYLPGVAPQDFQKGDLLQVKVNKLTSVKTQLPYTYYSLPYCSPAKIQDSAENLGEVLRGDRIENSLYAFKMREPQLCNVVCNRKLDAKSAKEFKEKINDEYRVNMILDNLPLVVPIKRSDMDSTVYQLGFHVGLKGQYSGSKEEKFFIHNHLAFTVKYHRDMQTESARIVGFEVKPFSVKHEYEGKWDEKTRLTTCDPHAKHTVVNSNTPQEVEENQEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPQNSDLLCVYVGTGVQFFGMILVTMIFAMLGFLSPSNRGGLMTAMLLLWVFMGLFAGYASTRLYKMFKGSEWKKIALRTAILFPASVSAIFAVLNTLIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIESPVKTNKIPRQIPEQAWYMNSAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIITCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMLIASYSFFVVTGTIGFYACFWFTRLIYSSVKID 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0197 635 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 635 - -
Lal4g0197 635 Pfam Endomembrane protein 70 54 591 IPR004240 GO:0016021
Lal4g0197 635 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 635 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0197 Lal-Chr4 1226794 1230772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0197 8 635 Miscellaneous Gene Families AT5G10840 85.238 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0197 K17086 - gmx:100780976 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0197 4 1226794 1230772 Lal4g0197 4 1226794 1230772 ECH
Lal17g0201 17 1207338 1211526 Lal4g0197 4 1226794 1230772 LSH
Lal21g0304 21 2014235 2018112 Lal4g0197 4 1226794 1230772 LSH