Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0201 ATGGCGTTATGGAGATCTATCGCTTTCTCTTCACTTCTCTCTCTTCTTTTCATCAATGTCGCTCACTCCTTCTACCTCCCTGGTGTCGCTCCACAGGACTTCCAAAAGGGAGATTTGTTGCAAGTGAAAGTAAACAAATTGACATCGATAAAGACACAGCTTCCATATACATATTATTCCCTCCCTTATTGTAGCCCAGCAAAAATACAGGATAGTGCAGAAAATCTCGGGGAAGTGCTTCGTGGTGACCGCATTGAGAATTCTCTTTATGTGTTTAAAATGCGTGAGGCACAAATGTGCAATGTCGTGTGTAATCGTAAACTTGATGCCAAAGCTGCTAAGGAGTTCAAAGAGAAGATCAATGACGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTGCCCATAAAAAGGAGTGATCAGGATTTGACTGTTTATCAACTGGGTTTCCATGTTGGACTCAAAGGACAGTATAGTGGGAGCAAAGAGGAGAAGTTTTTTATTCACAACCATTTGGCATTTACTGTCAAGTACCATAAAGATATACAAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTTAAGCCATTCAGTGTAAAACATGAATATGAAGGTAAGTGGGATGAAAAGACTCGTTTGACAACTTGTGACCCTCATGCTAAACACACAGTTGTCAACTCCAATACTCCCCAAGAGGTTGAAGAGAACCAGGAAATCATCTTCACTTATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGACCAAATTCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCCGGCATGGTGGCAATGATAATGCTGCGGACACTGTACCGTGACATTTCAAAGTACAATGATCTTGAAACCCAAGAAGAAGCTCAAGAAGAAACTGGTTGGAAGCTTGTCCACAGTGATGTCTTTAGGGCTCCTCAGAACTCAGACCTGCTCTGTGTTTATGTCGGAACTGGTATTCAGTTTTTTGGGATGATACTAGTAACCATGATCTTTGCCATCCTTGGGTTCCTTTCTCCTTCGAACCGAGGTGGGCTAATGACAGCCATGCTATTGCTTTGGGTTTTCATGGGACTTTTTGCTGGTTATGCCTCAACTCGCTTATACAAAATGTTCAAAGGGTCAGAGTGGAAGAAAATTGCCTTCAGGACTGCAATCCTGTTCCCTGCTTCTGTCTCTGCCGTTTTCGCTGTATTAAACACTTTAATATGGGGGCAGAAATCATCTGGAGCTGTTCCATTTGGTACCATGTTTGCTCTGATCTTTTTATGGTTTGGGATCTCAGTTCCACTTGTCTTTGTGGGGAGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAATCCAGTGAAGACGAATAAAATCCCAAGACAGATCCCTGAGCAGGCCTGGTACATGAACCCAGCCTTCTCAGTTCTGATTGGTGGGATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATACTCACATCGATCTGGTTGAATCAGTTTTACTACATTTTCGGATTCCTCTTTTTGGTCTTCATCATCCTCATCATCACATGTGCTGAGATAACCATTGTGCTCTGCTATTTCCAGCTGTGCAGTGAAGATTACTTGTGGTGGTGGCGGTCATACCTCACCTCTGGTTCTTCTGCACTATATCTATTTCTTTATGCAACATTTTACTTCTTCACCAAGCTTGAAATAACGAAGTTGGTATCTGCAATATTATACTTTGGATACATGCTTATAGCTTCTTACGCGTTCTTTGTGGTGACTGGTACTATTGGATTTTATGCATGCTTTTGGTTCACAAGGCTCATATACTCCTCAGTCAAAATTGACTAG 1911 0.4176 MALWRSIAFSSLLSLLFINVAHSFYLPGVAPQDFQKGDLLQVKVNKLTSIKTQLPYTYYSLPYCSPAKIQDSAENLGEVLRGDRIENSLYVFKMREAQMCNVVCNRKLDAKAAKEFKEKINDEYRVNMILDNLPLVVPIKRSDQDLTVYQLGFHVGLKGQYSGSKEEKFFIHNHLAFTVKYHKDIQTESARIVGFEVKPFSVKHEYEGKWDEKTRLTTCDPHAKHTVVNSNTPQEVEENQEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNDLETQEEAQEETGWKLVHSDVFRAPQNSDLLCVYVGTGIQFFGMILVTMIFAILGFLSPSNRGGLMTAMLLLWVFMGLFAGYASTRLYKMFKGSEWKKIAFRTAILFPASVSAVFAVLNTLIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIITCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0201 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 636 IPR004240 GO:0016021
Lal17g0201 636 Pfam Endomembrane protein 70 55 592 IPR004240 GO:0016021
Lal17g0201 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0201 Lal-Chr17 1207338 1211526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0201 11 636 Miscellaneous Gene Families AT5G10840 85.669 0.0 1110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0201 K17086 - gmx:100780976 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0201 17 1207338 1211526 Lal17g0201 17 1207338 1211526 ECH
Lal17g0201 17 1207338 1211526 Lal21g0304 21 2014235 2018112 LSH
Lal17g0201 17 1207338 1211526 Lal4g0197 4 1226794 1230772 LSH