Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0171 ATGAACGATAATAACTCCACCGTCCGAAAACGCCGCCGTATTAACTCCGATTCCGATGATGGGTCAACTCAAAAGAAGAAGAAGAAAGAAGAAGAAGTGAGTGACACCCTCACTTCATTCTTAGATAAAGAAGACCAAGAAGAATTTGAGAGAATCTCAGAAGAAGAGAAGCTATCAAATGAAACAAATCACATGGAGAAGAAAAACGCGATGCTTGATTACTATTCCAATCACCATGATTCCTACAGAGATGTTGTTGAAGAGTCAGAAAAACTCAAGAGGAAGAGATCACGTGCAACCGCCACCGAAGACGGTGCTGATTCCAAAGATGCTAAATCTAGCGGTGGCGGTGGTGTTCAACGGCGGCTTTGGGTTAAGGACCGATCAGGAGCGTGGTGGGATGAATGCAAGAAACCTCAATTTCCAGAACAAGAGTTCAAAAAAGCTTTCAGAATGGGAAAAGCAACATTTGAAGCAATTTGTGAAGAATTGAATTCGGTGATTGCAAAAGAGGACACAACTTTGAGAAATGCAATTCCAGTGAGGCAGAGAGTAGCGGTTTGTCTTTGGAGGTTAGCCACTGGTGACCCATTAAGGCTTGTCTCAAAAAGATTCGGACTTGGGATTTCAACTTGTCATAAACTTGTTCTTGAGGTTTGCACTGCAATCAAGAATGTGCTTATGCCTAAGTACTTGAATTGGCCTGATGAGGTTTCATTGATGAAGATTAAGAATGAGTTTGAGTCCATTTCGAGTATTCCTAATGTTGTTGGATCAATATATACCTCACATGTGCCTATTATAGCTCCTAAGATTAGTCTTGCCTCTTATTTTAATAAGAGGCATACTGAGAGGAATCAAAAGACTTCGTATTCCATTACGGTTCAGGGAGTTGTTGATCCGAGAGGGGTGTTCACTGATGTTTGTATTGGTTGGCCAGGGTCCATGAATGATGATCAAGTGTTGGAAAAATCCGCCCTTTTTCATAGGGCTAATGGAGGACTTATGAAGGGTGTGTGGATTGTTGGGGGTTCCGGGTACCCGTTGATGGATTGGGTTTTGGTTCCATATACTCAGCAGAATCTTACTTGGACGCAGCATGCTTTCAATGAGAAGACTAGTGAGGTTCAGAAGGTTGCTAAGGACGCGTTTGCGAGGTTGAAAGGGAGGTGGAGTTGCTTGCAGAAGAGGACTGAGGTGAAGCTGCAAGATTTGCCTGTTGTCCTTGGGGCTTGCTGTGTGTTGCATAATATATGTGAGTTGAGAAATGAAGAAATTGATCCTGAGTTGATGTTTGATATTATTGATGATGATATGGTACCAGAGGTTGCGTTGAGATCGATTAACTCCATGAAGGCAAGGGATGCTATTGCTCATGATCTTTTACACCATGGACTTGCAGGAACTAAATTTCTTTAG 1419 0.4235 MNDNNSTVRKRRRINSDSDDGSTQKKKKKEEEVSDTLTSFLDKEDQEEFERISEEEKLSNETNHMEKKNAMLDYYSNHHDSYRDVVEESEKLKRKRSRATATEDGADSKDAKSSGGGGVQRRLWVKDRSGAWWDECKKPQFPEQEFKKAFRMGKATFEAICEELNSVIAKEDTTLRNAIPVRQRVAVCLWRLATGDPLRLVSKRFGLGISTCHKLVLEVCTAIKNVLMPKYLNWPDEVSLMKIKNEFESISSIPNVVGSIYTSHVPIIAPKISLASYFNKRHTERNQKTSYSITVQGVVDPRGVFTDVCIGWPGSMNDDQVLEKSALFHRANGGLMKGVWIVGGSGYPLMDWVLVPYTQQNLTWTQHAFNEKTSEVQKVAKDAFARLKGRWSCLQKRTEVKLQDLPVVLGACCVLHNICELRNEEIDPELMFDIIDDDMVPEVALRSINSMKARDAIAHDLLHHGLAGTKFL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0171 472 MobiDBLite consensus disorder prediction 1 72 - -
Lal4g0171 472 PANTHER UNCHARACTERIZED 26 471 IPR045249 -
Lal4g0171 472 MobiDBLite consensus disorder prediction 85 110 - -
Lal4g0171 472 Pfam DDE superfamily endonuclease 260 417 IPR027806 -
Lal4g0171 472 PANTHER NUCLEASE 26 471 - -
Lal4g0171 472 MobiDBLite consensus disorder prediction 85 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0171 Lal-Chr4 1080253 1081671 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0171 - - gmx:100804219 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0171 4 1080253 1081671 Lal4g0171 4 1080253 1081671 ECH
Lal21g0273 21 1815439 1816884 Lal4g0171 4 1080253 1081671 ECH