Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0273 ATGAATGAAATTTCCACTGCCACCAGAAAACGCCGCCGTAAAAACTCCGACGCCGACGACGGGAATAAGAACAAAGAAGTAAAGGGAATCCTCACTTCACTCCTTTTTCTCGATGAGCAAGAAAAACATGACCAATTGGAGCTTCAAAAAATCTCAGAAGAGGAGAAAAACTCGATTGAAAATAATCACAAGAAGAAGAAAAACGCTATGTTTGATTACTATTCCAATCTCGATGGTTACTACAGCGAGGTTGAAGAATCAGAACAAATCAAGAGGAAGAAATCACGTGGCGTGGCACGTGCAGCGTTGGTGGCAGTTACCGCCACCACCACCACAGAAGATGGTGCTGATTCCAAAGATGCTAAATCCGGTGGCGGTGTTCCACGGCGGCTTTGGGTTAAGGACCGATCAGGAGCGTGGTGGGATGAATGTAACAAACCTGAATTTCCAGAACAAGAGTTCAAAAAAGCATTCAGAATGGGAAAGGTAACATTTGATGCAATTTGTGAGGAACTAAATTCTGTAATTGCAAAAGAGGACACAACTTTAAGAAATGCAATTCCAGTGAGGCAAAGAGTAGCGGTTTGTCTTTGGAGATTAGCCACTGGTGACCCTTTAAGGCTTGTGTCAAAAAGATTCGGTCTTGGTATTTCAACTTGTCATAAACTTGTTCTTGAAGTTTGCACTGCAATTAAGAATGTGCTTATGCCTAAGTATTTGCAATGGCCTCATGAGGTTTCAATTAGGAATATTAAGAATGAGTTTGAGTCAATTTCTGGTATTCCTAATGTTGTTGGATCTATGTATACCTCACATGTTCCTATTATAGCTCCTAAGATTAGTGTTGCTGCTTATTTCAATAAGAGGCATACTGAGAGGAATCAGAAGACTTCGTATTCGATTACGGTTCAGGGTGTTGTTAATCCAAGAGGGGTGTTTACTGATGTTTGTATTGGTTGGCCGGGGTCCATGAATGATGATCAGGTGTTGGAAAAATCTGCACTTTTTCATCGGGCTAATAGCGGGTTTATGGAAGGTATGTGGGTTGTTGGAGGTTCAGGGTATCCTTTGATGGATTGGGTTTTGGTTCCTTATACTCAGCAGAATCTTACTTGGACGCAGCATGCTTTCAATGAGAAGATCGGTGAGGTTAAGAAGATCGCTAAGGACGCGTTTGCGAGGTTGAAAGGAAGGTGGGGTTGCTTGCAGAAGAGGACTGAGGTGAAGCTGCAAGATTTGCCGGTTGTACTTGGGGCTTGTTGTGTGTTGCATAATATATGTGAGTTGAGGAATGAAGAAATTGATCCTGAATTGTTTATGATTGATATTGTTGATGATGATATGGTGCCCGAGGACGCGTTGAGATCGGTTAGCTCCATGAAAGCAAGGGATGCTATTGCTCATAATCTTTTACACCATGGACTTGCAGGCACTAAGTTCCTATAA 1446 0.4219 MNEISTATRKRRRKNSDADDGNKNKEVKGILTSLLFLDEQEKHDQLELQKISEEEKNSIENNHKKKKNAMFDYYSNLDGYYSEVEESEQIKRKKSRGVARAALVAVTATTTTEDGADSKDAKSGGGVPRRLWVKDRSGAWWDECNKPEFPEQEFKKAFRMGKVTFDAICEELNSVIAKEDTTLRNAIPVRQRVAVCLWRLATGDPLRLVSKRFGLGISTCHKLVLEVCTAIKNVLMPKYLQWPHEVSIRNIKNEFESISGIPNVVGSMYTSHVPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVNPRGVFTDVCIGWPGSMNDDQVLEKSALFHRANSGFMEGMWVVGGSGYPLMDWVLVPYTQQNLTWTQHAFNEKIGEVKKIAKDAFARLKGRWGCLQKRTEVKLQDLPVVLGACCVLHNICELRNEEIDPELFMIDIVDDDMVPEDALRSVSSMKARDAIAHNLLHHGLAGTKFL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0273 481 MobiDBLite consensus disorder prediction 1 24 - -
Lal21g0273 481 Pfam DDE superfamily endonuclease 269 425 IPR027806 -
Lal21g0273 481 PANTHER NUCLEASE 23 480 - -
Lal21g0273 481 PANTHER UNCHARACTERIZED 23 480 IPR045249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0273 Lal-Chr21 1815439 1816884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0273 - - gmx:100804219 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0273 21 1815439 1816884 Lal21g0273 21 1815439 1816884 ECH
Lal21g0273 21 1815439 1816884 Lal4g0171 4 1080253 1081671 ECH