Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0167 ATGGAGGAAGGGTACCCCAGAAGCAGCAACTTCAAGAGGATATGTGTCTTCTGTGGCAGCAACTCTGGTAACCGAGAAGTTTTCAGTGATGCTGCTATTCAATTAGGCAATGAACTTGTTAATCGGAAGATAGACTTGGTGTATGGTGGAGGAAGTGTTGGGCTAATGGGTTTAATATCCCTGAGAGTGTATGATGGAGGCTGCCATGTCTTAGGGATTATTCCAAAAGCTCTCATGCCTCTTGAGATATCTGGTGAAACAGTAGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGGTATGGAACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATTCACAAAAAACCTGTTGGTCTACTGAATGTTGATGGTTACTATAACTCTTTGCTTTCTCTATTTGACAATGGTGTTAAAGAAGGGTTCATTAAGCCAGATGCACGTGATATAGTTATCTCTGCTCCATCAGCAAAAGAACTTATGATGAAGATGGAGCAATATACTCCTATGCATGAACACGTTGCCCCTCATGAGAGCTGGCAGATGAAGCAATTAGGTAATTATGAAGGACAAGAAAATGCAGAGTGA 654 0.4251 MEEGYPRSSNFKRICVFCGSNSGNREVFSDAAIQLGNELVNRKIDLVYGGGSVGLMGLISLRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNSLLSLFDNGVKEGFIKPDARDIVISAPSAKELMMKMEQYTPMHEHVAPHESWQMKQLGNYEGQENAE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0167 217 TIGRFAM TIGR00730: TIGR00730 family protein 12 189 IPR005269 GO:0009691|GO:0016787
Lal4g0167 217 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 9 207 - -
Lal4g0167 217 Gene3D - 10 205 - -
Lal4g0167 217 Pfam Possible lysine decarboxylase 56 186 IPR031100 -
Lal4g0167 217 SUPERFAMILY MCP/YpsA-like 11 189 - -
Lal4g0167 217 PANTHER LOG FAMILY PROTEIN YJL055W 9 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0167 Lal-Chr4 1048844 1052156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0167 K22522 - gmx:100785484 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0167 4 1048844 1052156 Lal4g0167 4 1048844 1052156 ECH
Lal17g0155 17 957253 960544 Lal4g0167 4 1048844 1052156 LSH