Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0155 ATGGAGAAAGGGTACCCCAAAACCACCAACTTCAAGAGGATATGTGTCTTCTGCGGTAGCAACTCTGGTAACCGAGATGTTTTCAGTGACGCTGCGATTCAATTAGGCAATGAACTGGTTCAGAGGAAGATAGACTTGGTGTATGGTGGTGGAAGTGTAGGGTTGATGGGATTAATATCTCAGAGAGTGTATGATGGAGGCTGCCATGTTCTAGGGGTCATTCCAAAAGCTCTGATGCCTCTTGAGATATCTGGTGCAACAGTAGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATATGGAACCATGGAAGAGCTTTTGGAGATGATAACTTGGGCCCAACTTGGAATTCATAAAAAACCGGTTGGTCTATTGAATGTCGATGGTTACTATAACTGTTTGCTTGCACTATTTGACAATGGCGTTAAAGAAGGCTTCATTAAGCCTGGTGCACGTGATATAGTTATCTCTGCTCCGTCGGCCAAAGAACTTGTGATGAAGATGGAGCAATATGCTCCTACGCATGAACATGTTGCCCCTCATGAGAGCTGGCAGATGAAGCAGTTAGGCAATTATCCAGGACAAGAAAATGCAGAGTGA 654 0.445 MEKGYPKTTNFKRICVFCGSNSGNRDVFSDAAIQLGNELVQRKIDLVYGGGSVGLMGLISQRVYDGGCHVLGVIPKALMPLEISGATVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPGARDIVISAPSAKELVMKMEQYAPTHEHVAPHESWQMKQLGNYPGQENAE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0155 217 Pfam Possible lysine decarboxylase 56 186 IPR031100 -
Lal17g0155 217 PANTHER LOG FAMILY PROTEIN YJL055W 10 207 - -
Lal17g0155 217 MobiDBLite consensus disorder prediction 195 217 - -
Lal17g0155 217 SUPERFAMILY MCP/YpsA-like 10 189 - -
Lal17g0155 217 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 10 207 - -
Lal17g0155 217 Gene3D - 10 205 - -
Lal17g0155 217 TIGRFAM TIGR00730: TIGR00730 family protein 12 189 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0155 Lal-Chr17 957253 960544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0155 K22522 - gmx:100785484 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0155 17 957253 960544 Lal17g0155 17 957253 960544 ECH
Lal17g0155 17 957253 960544 Lal4g0167 4 1048844 1052156 LSH