Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0159 ATGAAGAATGGAGCAGAGAGAATGTGCATGACATCCCCATCCATTGATGAATTTGTTCATGCTTTGAAGCTAACTGTATTGGCTAATAAACGTTGGGTTCCTCCTCCGGGGAAAGGATCATTGTACCTAAGACCTCTGCTCTTAGGAACTGGTCCTGTTTTGGGTTTGGCTCCATCACTTGATTACACTTTCCTCATATATGCTTCCCCTGTTCGCAGTTATTTCAAAGAGGGTTCAGCCCCACTCAACTTGTGCGTGGATGAGGATTTTGATCGTGCTTGTCCTCGTGGTACAGCAAGTGTTAAAACCATTTCCAATTATGCATTTCAAACCTTTTACTGGAAAAAAAATGTCTTGATGGCACAAACTAGAGCCAAGAGCAGAGGGTTTTCAGATGTGATATACCTGGATTCAGCCACCAAGAAAAATGTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGGCAAGGACAAATACATCTCAACACCTGCTACCAATGGAACAATTCTTCCTGGAATTACAAGAAAAAGTGTCATCGAAATTGCTCGTGATCAAGGCTATCAGAAAAGCGCATATGAAGTTTTCTGCACAGGTACTGCCGTTGGTGTTGCCCCTGTAGGGAGTATCACATACCAAGATAGAAAGGTGGAATATATAACAGGCTATAGAACCATTTGTGAAGAGCTGAACACTACCCTTTTAGGTATTCAAAGGGGTGTTATTGAAGATAAGTATGGATGGATGATCGAAATTGACTGA 759 0.4163 MKNGAERMCMTSPSIDEFVHALKLTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPSLDYTFLIYASPVRSYFKEGSAPLNLCVDEDFDRACPRGTASVKTISNYAFQTFYWKKNVLMAQTRAKSRGFSDVIYLDSATKKNVEEVSSCNIFIGKDKYISTPATNGTILPGITRKSVIEIARDQGYQKSAYEVFCTGTAVGVAPVGSITYQDRKVEYITGYRTICEELNTTLLGIQRGVIEDKYGWMIEID 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0159 252 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 1 248 IPR036038 GO:0003824
Lal4g0159 252 Gene3D - 1 83 IPR043131 -
Lal4g0159 252 PANTHER AMINO ACID AMINOTRANSFERASE 1 252 IPR005786 GO:0004084|GO:0009081
Lal4g0159 252 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 1 252 - -
Lal4g0159 252 ProSitePatterns Aminotransferases class-IV signature. 146 175 IPR018300 GO:0003824
Lal4g0159 252 Gene3D - 84 252 IPR043132 -
Lal4g0159 252 Pfam Amino-transferase class IV 1 209 IPR001544 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0159 Lal-Chr4 992009 1000513 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0159 K00826 - gmx:100818776 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0159 4 992009 1000513 Lal4g0159 4 992009 1000513 ECH
Lal21g0257 21 1704055 1713491 Lal4g0159 4 992009 1000513 LSH