Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0151 ATGTCATGGTTGGCGCATTCCCTGGCAAACTCACTCCGATTGGACGAAAACGACACCGTATCAGACCCTCAAACTACGAACTATAGCGATCAACCTTCATCAGAAGAATTTGAAGGGCATGGAGTCAAAGAGGATCTCAATGAAATCAAACAAACCCTAACTCGTCAATTGTGGGGAATGGCATCTTTCCTTGTTCCTCCTCCTCCACCACCACCACCTCCAGGCCCAAGCCCAGGCCCATCCATTTCCAATTCCAATTCCATTCAATCACAATCTGAAAATGAACAAGTTGTTGTTGACGCGGTTGTTTCCAATCAGATTCAAAATTGTTATATCGATGATCAGGATCAGGAACTGGAAATGGAGGAGTGGGCGATTGAACACGCTGTTGGGATTACGGATGAGGTGTTAACCTTTGCTATCAATATCTCTATGCATCCTGAAACGTGGTTGGATTTTCCTATTCAGGAAGAAGATGATACTCATGAAGCTCCAAAAACCGCAATTCGAAAACACTTTAGTGCTGTCATGGATTTTGATATGTCTGATGCCCAACGGGACCATGCTGTGGCCATTGAGAGACTTGCTCCTAGATTAGCTGCACTCAGAATTGAATTATGTCCTTGCCATATGAGTGAAAGTTACTTCTGGAAAGTGTATTTTGTGCTTTTACATTCAAGGCTTCATAAACAAGATGCAGAGATTTTGTCCACGCCTCAGGTCATGGCAGCCAGAGGAGCGTGGATGCAGGAATTGCACAAACAAACGAAACCTGAAGTTGAATCTTTCAGAATAAGCAGTGCCTACTCAAGAGACATTGCTCAGCATGATGATTTTGCTCCCAGCTTTTCAGATCATGTCTATTCTAATGACATGCCTCATCTGTCATATGGATATGAAACAAGGATAGCAGATAATGAGACAGAGAAGCACACGGTTGAAAGTTCTGAAACACGTTTCATTGACAAGTCTGTTATTGAGGAAAGTCCAACTGGGAACAAGGATATAAAATGTGGTCATTACTCTCAAATTATTATTCAAGATTATGATGATGATGATGAATGGCCAGACGAAGATTCTGATTTAGGGGGTTATAGTAGAACGACTCTCCCCATGGTGGATGAAGAAGACATATCTTTTAGTGATCTTGAGGATGATGATTATGACATTAAACGTGTTAGTTCCACTACAGGTTCAAAGTTGGTATGA 1209 0.4194 MSWLAHSLANSLRLDENDTVSDPQTTNYSDQPSSEEFEGHGVKEDLNEIKQTLTRQLWGMASFLVPPPPPPPPPGPSPGPSISNSNSIQSQSENEQVVVDAVVSNQIQNCYIDDQDQELEMEEWAIEHAVGITDEVLTFAINISMHPETWLDFPIQEEDDTHEAPKTAIRKHFSAVMDFDMSDAQRDHAVAIERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLHKQDAEILSTPQVMAARGAWMQELHKQTKPEVESFRISSAYSRDIAQHDDFAPSFSDHVYSNDMPHLSYGYETRIADNETEKHTVESSETRFIDKSVIEESPTGNKDIKCGHYSQIIIQDYDDDDEWPDEDSDLGGYSRTTLPMVDEEDISFSDLEDDDYDIKRVSSTTGSKLV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0151 402 SUPERFAMILY BSD domain-like 131 232 IPR035925 -
Lal4g0151 402 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 399 - -
Lal4g0151 402 Gene3D BSD domain 129 238 IPR035925 -
Lal4g0151 402 MobiDBLite consensus disorder prediction 81 96 - -
Lal4g0151 402 ProSiteProfiles BSD domain profile. 183 228 IPR005607 -
Lal4g0151 402 MobiDBLite consensus disorder prediction 1 45 - -
Lal4g0151 402 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 399 - -
Lal4g0151 402 MobiDBLite consensus disorder prediction 350 370 - -
Lal4g0151 402 Pfam BSD domain 178 232 IPR005607 -
Lal4g0151 402 MobiDBLite consensus disorder prediction 61 96 - -
Lal4g0151 402 SMART wurzfinal6 176 228 IPR005607 -
Lal4g0151 402 MobiDBLite consensus disorder prediction 63 80 - -
Lal4g0151 402 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0151 Lal-Chr4 945285 949641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0151 131 226 EF-hand Containing Proteins AT1G69030 31.313 1.29e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0151 - - gmx:100794286 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0151 4 945285 949641 Lal4g0151 4 945285 949641 ECH
Lal17g0135 17 831039 841398 Lal4g0151 4 945285 949641 LSH