Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0135 ATGTCATGGTTGGCACGTTCCCTAGCAAACACGCTTCGACTAGATGAGGAGAGATATGATGAAAACGACATCGTATCAGACTCTCAAACTATGTCCCCGAGAAGAAACTACATTCATCTGAAACATCATAATCAACTGTTATCACCAGAAGAAGAAGGTGAAGGGCGTGGAGTGAAAGAGGATCTTCATGAAATCAAACAAACCCTAACCCGACAATTGTGGGGAATGGCCTCTTTCCTCGCTTCTCCATCAACTTCTAATCAATCTGAATCAGACTTTGATCACTCTCTTTCTTCACTTCCACAAGGAGAACCGCTTTACAACGTTGCTGTTTCCGATCAGGAACCGGAAATTGAGGAGGAGGAGGAGGTGGCGGTTGTTGGGATTACCGATGAGGTGTTAACTTTTGCTATGAATATTGCTATGCATCCAGAAACGTGGTTGGATTTTCCACTTGAAGAAGAAGATGACACTGATGATTTTGAGATATCCTATGCGCAACAGGAGCATGCTGCGGCTATTGAAAGACTTGCTCCTAGTCTAGCTGCACTTAGAATTGAATTATGTCCTTGCCATATGAGTGAAAGTTACTTCTGGAAAGTTTATTTTGTGCTTTTACATTCAAGGCTTCATAAACAAGATGCAGAGATTTTGTTTACGCCTCAGGTGATGGTGGCTAGAGCAAGGTGGATGCAGGAGTTACACAAACAAATGAAGCCTGATGTTGAATCTTTCAGAATAAGCAGCACCTACTCAAGAGACATTGCTCAGCATGATGATTTTGGCCCCAACTTATCAGATGGTGCCTATTTTGGTGACATGACTCATTGGACACATGAATATGAAGCAAGGACAGCAGATAACGAGACAGAGAAGCACATGGATGAAAGTTCTGAAACACGTTTCACTGTCAAGTCTGTTATTGAGGAAAATCTAAGTGGGAACAAGGATCTAAATTGTGGTCGATCCTCTCAAGTTATTATAGAGGACTATGATGATGATGATGAATGGCCAGAGGAAGATTCTGATTTAGGGGGATATTGTAGAACAATTCTTCCAATAGTGAATGAAGAAGACATATCTTTCAGTGATCTCGAGGATGATGATTATGGCATTAAACCTGTTAATCCCAATGCAGATTCAAAGGTGAGTACAAGTGAAATGGAATAA 1170 0.4128 MSWLARSLANTLRLDEERYDENDIVSDSQTMSPRRNYIHLKHHNQLLSPEEEGEGRGVKEDLHEIKQTLTRQLWGMASFLASPSTSNQSESDFDHSLSSLPQGEPLYNVAVSDQEPEIEEEEEVAVVGITDEVLTFAMNIAMHPETWLDFPLEEEDDTDDFEISYAQQEHAAAIERLAPSLAALRIELCPCHMSESYFWKVYFVLLHSRLHKQDAEILFTPQVMVARARWMQELHKQMKPDVESFRISSTYSRDIAQHDDFGPNLSDGAYFGDMTHWTHEYEARTADNETEKHMDESSETRFTVKSVIEENLSGNKDLNCGRSSQVIIEDYDDDDEWPEEDSDLGGYCRTILPIVNEEDISFSDLEDDDYGIKPVNPNADSKVSTSEME 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0135 389 SUPERFAMILY BSD domain-like 128 214 IPR035925 -
Lal17g0135 389 MobiDBLite consensus disorder prediction 365 389 - -
Lal17g0135 389 SMART wurzfinal6 158 210 IPR005607 -
Lal17g0135 389 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 98 - -
Lal17g0135 389 PANTHER BSD DOMAIN-CONTAINING PROTEIN 117 382 - -
Lal17g0135 389 Gene3D BSD domain 127 218 IPR035925 -
Lal17g0135 389 ProSiteProfiles BSD domain profile. 155 210 IPR005607 -
Lal17g0135 389 Pfam BSD domain 158 214 IPR005607 -
Lal17g0135 389 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 98 - -
Lal17g0135 389 PANTHER BSD DOMAIN-CONTAINING PROTEIN 117 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0135 Lal-Chr17 831039 841398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0135 128 208 EF-hand Containing Proteins AT1G69030 30.769 1.16e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0135 - - gmx:100794286 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0135 17 831039 841398 Lal17g0135 17 831039 841398 ECH
Lal17g0135 17 831039 841398 Lal4g0151 4 945285 949641 LSH