Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0071 ATGGGAGAAAAATCGAGGTCGAGAGGAAGATGCTGCTGTTGGTTTATTGTGATTGTGATTCTGGCTGTGGCCGTGGCTGCTATTGTTTATAGCGTTAGGAAGAAGATTGGTCATTCTTCTAAGCCTGGTCCAGTTCCTGGCCCCCCTGGCGCTGTCCAACAAAAATATTCCTCTGCTCTCAAAATTTCATTGCAGTTCTTTGACATTCAGAAATCTGGAAAACTACTCAACAACAAAATACCTTGGAGAGGGGATTCAGCCCTTAAGGATGGTAGCCAAGCAAATTTGGATCTATCAAAAGGACTGTATGATGCTGGGGATAACATGAAGTTTGGTTTTCCCATGGCTTTTACTGCCACCGTTTTATCATGGGCTATTCTCGAATATGGAGATCAAATGGATCATGTTGGCCAGTTGGAACCGGCACAAGGTTCGCTCAAATGGATAACTGATTTTCTCATCAATGCTCACCCTTCTGAGAATACTCTTTATATTCAGGTGGGTGATCCTGTTGCAGATCATGACTGTTGGCAAAAACCTGAAGCCATGACAGAGAAGCGGCCACTTATACAGGTGAACACATCTTGTTGTGGATCAGACGTTGCCGCTGAAACTGCAGCAGCCATGGCCTCAGCATCATTGGTCTTTAAAAAGATCGATTCTACATATTCAAGCACTCTCCTCAAGCATGCAAAACAGTTGTTTACTTTTGCTGACAATAATAGAGGATCTTATAGTGAGAATATACCTGAAATTGCTACATATTATAACTCAACTGGATACGGCGATGAGCTTTTATGGGCAGCTAGCTGGCTCTATCATGCTACAGGTGATGATTCATACCTTGATTATGTGACTGGTCAAAATGGAGAAGATTATGCTAATTGGGATAGTCCAACCTGGTTCAGTTGGGACAACAAGCTTGCTGGAACTCAGGTTTTGTTATCCAGATTAATCTTCTTTAAGGGAAAGGACATTTCAAATGCATATAGCTCTGGTCTCGAAAAATACAGAAAAACAGCTGAAGCTGTAATGTGTTCTCTTCTTCCAGACTCTCCAACAGCCACAAAAGGCAGAACAGATAGCTGGTCGGATTCTTTTGATGCAGCTTTGTCATCTTGTGGGGTGCAATCTTACCCCATGAATAGAAAATCTGTTTCCACGATTAGAACCTATTATGGTGGTCTTATATGGGTCAGTGAATGGAACTCTTTGCAGCATCCTGTTGCTTCTTCATTTTTGGCTGTTATATATAGTGACTATATGCTTACAACACAAACTCCAAATCTGGAATGTGGTTCTTATTCCTTTACACCATCAGATCTTCGAGACTTTGCTAAATCTCAGGCTGATTATGTATTGGGCAAGAATCCTATGGGAATCAGTTTTCTAGTGGGATATGGAGACAAATTCCCAGAGTTTGTGCATCATAGGGGAGCTTCAATTCCTAAAGATTCAAAAATTGGGTGCAAAGAGGGTTTCAAGTGGCTTGACTCAACTGAACCTAATCCTAATGTAGCAACTGGAGCACTTGTTGGTGGACCCTTCTTAAATGAGACTTTCATTGATTCAAGGAACAACTCCATGCAAACAGAACCAACCACATATAACAGTGCAATCATCGTTGGACTCTTATCAAGTTTAGTCACCACTTCTTCTGCTGTTCAATCATTTACCTAA 1680 0.4149 MGEKSRSRGRCCCWFIVIVILAVAVAAIVYSVRKKIGHSSKPGPVPGPPGAVQQKYSSALKISLQFFDIQKSGKLLNNKIPWRGDSALKDGSQANLDLSKGLYDAGDNMKFGFPMAFTATVLSWAILEYGDQMDHVGQLEPAQGSLKWITDFLINAHPSENTLYIQVGDPVADHDCWQKPEAMTEKRPLIQVNTSCCGSDVAAETAAAMASASLVFKKIDSTYSSTLLKHAKQLFTFADNNRGSYSENIPEIATYYNSTGYGDELLWAASWLYHATGDDSYLDYVTGQNGEDYANWDSPTWFSWDNKLAGTQVLLSRLIFFKGKDISNAYSSGLEKYRKTAEAVMCSLLPDSPTATKGRTDSWSDSFDAALSSCGVQSYPMNRKSVSTIRTYYGGLIWVSEWNSLQHPVASSFLAVIYSDYMLTTQTPNLECGSYSFTPSDLRDFAKSQADYVLGKNPMGISFLVGYGDKFPEFVHHRGASIPKDSKIGCKEGFKWLDSTEPNPNVATGALVGGPFLNETFIDSRNNSMQTEPTTYNSAIIVGLLSSLVTTSSAVQSFT 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0071 559 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 452 478 IPR018221 -
Lal4g0071 559 PANTHER ENDO-1,4-BETA-GLUCANASE 10 559 - -
Lal4g0071 559 Gene3D - 52 552 IPR012341 GO:0005975
Lal4g0071 559 SUPERFAMILY Six-hairpin glycosidases 55 551 IPR008928 GO:0005975
Lal4g0071 559 Pfam Glycosyl hydrolase family 9 56 545 IPR001701 GO:0004553|GO:0005975
Lal4g0071 559 PANTHER ENDOGLUCANASE 2 10 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0071 Lal-Chr4 412248 416664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0071 1 558 Glycoside Hydrolase AT1G75680 65.775 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0071 - - gmx:100812226 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0071 4 412248 416664 Lal4g0071 4 412248 416664 ECH
Lal21g0116 21 788840 792820 Lal4g0071 4 412248 416664 LSH