Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0116 ATGGGAGAAAAATCGAGATCCAAAGGAGGGTGTTGTGGTTGGTTTATTGCCATTGCGGTTCTAGCTATCGTTGTAGCTGCGGTTGTGTATACAGTTAAGGTTAAGATTCGTCACTCTCATAGTGATAAACCTGCTCCTGTTCCTGGTCCACCTGGTGCCGTTCAACAAAAATATTCCTCTGCTCTTAAAACTTCATTGCAGTTCTTAGACATTCAGAAATCTGGAAAGTTAGCCAACAATAAAATACCTTGGAGAGGGGATTCAGCTCTTAAGGATGGAAGCGAAGCAAGTTTGGATCTATCAAAAGGACTGTATGATGCTGGGGATAATATGAAGTTTGGTTTTCCCATGGCTTTTACTGCCACTGTGTTATCATGGACCATTCTCGAATATGGAGATCAAATGGATCATGTTGGACAACTGGAGTCAGCGCAAGATTCACTCAAGTGGATCACTGATTTTCTCATCAATGCTCACCCTTCTGAAAATACTCTTTATATTCAGGTGGGCGATCCTGCTGTAGACCATGGCTGTTGGCAAAGACCTGAAGCCATGACTGAGAAGCGGCCACTTATACAGATAAACTCATCTTGTCCTGGATCAGACATTGCAGCTGAAACTGCAGCAGCCATGGCATCAGCATCTTTGGTCTTTAAAAAGAGTGATTCTACATATTCAAGCACTCTCCTCAAGCATGCAAAACAGTTGTTTACTTTTGCTGACAAGAATAGAGGATCTTATAGTGAGTATATACCTGAAGTTGCTACATATTATAACTCAACTGGATATGGCGATGAGCTTTTATGGGCAGCTAGCTGGCTCTATCATGCTACAGGTGATGATTCATACCTTGAGTATGTGACTGGCCAAAATGGAGAAGATTATGCTAATTGGGGTAGTCCAACCTGGTTTTCTTGGGACAGCAAGCTTGCTGGAACTCAGGTTCTGTTATCCAGATTAAGCTTCTTTAAGGGAAAGGACATTTCAAATGCATATAGCTCTGGCCTCCAAAATTACAGAAAAACAGCTGACGCTGTAATGTGCGGCCTTCTTCCAGATTCCCCAACAGCCACAAAAAGCAGAACAGATGGTGGTCTTATATGGGTCAGTGAATGGAATTCTTTGCAGCATCCTATTGCTTCTGCATTTTTAGCTGCTCTATACAGTGACTATATGCTTACAACACGAACTCCAAAACTGAAATGTGGTTCAGATTCCTTTAGACCATCAGATCTTCGAGATTTTGCCAAATCCCAGGCTGATTATGTATTGGGCAAGAATCCTATGAAAATGAGTTTTCTAGTGGGATATGGTGATAAGTTCCCAGAGTTTGTGCATCACAGAGGAGCTTCAATTCCTATTGATTCAAAAACTAACTGCAAAGATGGTTTCAAGTGGCTTGACTCAACTGATCCTAACCCCAATGTAGCTACTGGAGCACTTGTTGGTGGACCCTTCTTAAATGAGACATTCATAGATTCAAGGAACAATTCAATGCAAACAGAACCAACCACATATAACAGTGCCATCATAGTTGGGCTCTTATCAAGTTTAGTCACCACTTCTTCTGCCGTTCAATCATTTACATAA 1590 0.4164 MGEKSRSKGGCCGWFIAIAVLAIVVAAVVYTVKVKIRHSHSDKPAPVPGPPGAVQQKYSSALKTSLQFLDIQKSGKLANNKIPWRGDSALKDGSEASLDLSKGLYDAGDNMKFGFPMAFTATVLSWTILEYGDQMDHVGQLESAQDSLKWITDFLINAHPSENTLYIQVGDPAVDHGCWQRPEAMTEKRPLIQINSSCPGSDIAAETAAAMASASLVFKKSDSTYSSTLLKHAKQLFTFADKNRGSYSEYIPEVATYYNSTGYGDELLWAASWLYHATGDDSYLEYVTGQNGEDYANWGSPTWFSWDSKLAGTQVLLSRLSFFKGKDISNAYSSGLQNYRKTADAVMCGLLPDSPTATKSRTDGGLIWVSEWNSLQHPIASAFLAALYSDYMLTTRTPKLKCGSDSFRPSDLRDFAKSQADYVLGKNPMKMSFLVGYGDKFPEFVHHRGASIPIDSKTNCKDGFKWLDSTDPNPNVATGALVGGPFLNETFIDSRNNSMQTEPTTYNSAIIVGLLSSLVTTSSAVQSFT 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0116 529 PANTHER ENDO-1,4-BETA-GLUCANASE 11 529 - -
Lal21g0116 529 PANTHER ENDOGLUCANASE 2 11 529 - -
Lal21g0116 529 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 422 448 IPR018221 -
Lal21g0116 529 Pfam Glycosyl hydrolase family 9 58 515 IPR001701 GO:0004553|GO:0005975
Lal21g0116 529 Gene3D - 54 522 IPR012341 GO:0005975
Lal21g0116 529 SUPERFAMILY Six-hairpin glycosidases 57 521 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0116 Lal-Chr21 788840 792820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0116 1 528 Glycoside Hydrolase AT1G75680 70.888 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0116 - - gmx:100812226 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0116 21 788840 792820 Lal21g0116 21 788840 792820 ECH
Lal21g0116 21 788840 792820 Lal4g0071 4 412248 416664 LSH