Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1383 ATGGGAACACATGAAATGATGCCATTAGATGATAAAGCAAAGAGAATGAGAGAACTATTATCCAGTTTTTACTCTCCAGACCCTTCAAACTCTCCTAACTCTTACAACACTTCTTCCAAATACACATCAATCGATGATATCAACTCCATCTCTTTTGATCCTGATCAGTATATGAATATCTTGGCACATAAGTCAAATTTGGAAGGGCTGCTCCAGAAGCATGTTCAAATGGCCGCAGAGATAAAGAATCTTGACACTGACCTGCAAATGCTTGTGTATGAGAATTATAACAAGTTCATATGCGCCACAGATACTATAAAGAGGATGAAAAGTAACATTTTGGGGATGGAAGGAAATATGGAAAATCTTCTTGAGAAGATCATGTCTGTGCAGTCAAGGAGTGACAATGTTAATACTTCTTTATTTGACAAGAGGGAGCATATAGAGAAACTGCATCGGACATGCAATCTTCTTCGTAAAATTCAGTTCATATATGATCTACCTGATAGACTTGTCAAGTGCATCAAATCTGAGGCCTATGCAGATGCAGTGAGGTTCTACACTGGTGCAATGCCAGTTTTTAAGGCATATGGAGACTCATCATTCCAGGATTGTAAGCGTGCATCTGAAGAAGCAATAGCTGTCATAATTAAAAACTTACAGGAAAAGGTATTTTCAGATTCTGAATCAATGCAAGTGAGAGCTGAATCTGCAGTACAACTTAAGCAGTTGAACTTTCCGGTAGATAATCTGAAAGCAAAGCTACTAGAGAAGTTAGAACATTCTCTTAAAGATGTTCAGTTGATCCCTGAAGAAATAGGAAATGCCTCTCCCTCTAATCATGAGGCTGCCATTTGTGAATTTGTGGAGGCAATTCGTGCATTTCGAGTAATATTTCCTGATTCGGAAGAGCAATTAGTTAAACTTGCTAGAGACTTAGTTACCAAGCACTTTGTAATTACTGAGGAGTATGTAAAGACACAAATTTCTGGAGCAGATTTACTTGCTGTTCTTCGAGTTATCTGGAATGATGTTCTCCTGATGGATAAAGTCTCGGGCGAAGCCGCTCTCTACGATCATTCGCTTGAGGCTGCCAAGGTTGTTATCAAGCTATATGTTACAAGTACATTTTCTTATCTTCTACAAGATATCTCAGATTCCCTCTTAAAAGTTGTGAAAAGGGATGGAGTGGAGAAGTACTCACTGGGAGTTTCTTTGGATGCTTCTTCAAAAGCAATTCTCCAAGGTGGCAAGAACTTCTTAGTGGATATCAACAAAATTCTAGATGACAACTCAGGAATTCTAGAAAAACTAAGAGAATTGATTATTGATTGGGTTCAAGAAGGGTTTCAAGAATTTTTTAGACAACTTGAGGATCAGTTCCTATTGCTTTCAGGAAGAAATAGTTCTATATCTACTCAAAATCATGGTTTTCCAGAAGAAGCTCAAGATGACAAAGCTTTGGCTGGACTTGTCCTGGTGCTGGCACAACTGTCTAGTTTTATAGAAAAAATCGCCATCCCGAGAATCACCGAGGAATCTGCAATTTCGTTCTCTGGTGATAGTGTTATAGGCTATGAATATGGACCTGCCTTCATTCCTAGAGAGATTTCGCAGAAATTTAGATCATCTGGTGATAAATTCTTGCAGCAGTACATAAGTATGAAAACTCAACGAGTATCACTTCTCCTGAAGAAGAGGTTTACCACACCTAATTGGGTTAAGCATAAAGAGCCAAGAGAAGTTCACATGTTTGTTGATTTATTTCTTCAAGAGCTAGAAGTTATTGGTAATGAAGTGAGGCAGATTTTGGCACAAGGTATACAAAAGCACCGCAGGGCTGCTAGTACTGGAAGCACTGCTTCATCAATAAGCAACTCTTTAAGAGAAGAGAAAATGGGTCGATCTAATACTCAAAAAGCTAGAAGCCAACTTTTGGAAACTCATCTAGCAAAATTGTTTAAGCAAAAAGTTCAAATTTTCACAAAAGTTGAATATACACAGGGATCAGTAGTTACAACCATAGTTAAATTGGGCCTTAAAAGTTTACAAGAATTTGTAAGACTTCAAACTTTCAATAGAAGTGGATTACAACAACTTCAGTTGGATATTCAATTCTTAAGGACTCCTTTGAGGGAAATAGTTGAAGATGAAGCTGCTATGGATTTCTTACTTGATGAGGTGATTGTTGCTGTTGCAGAAAGGTGCTTAGATCCAATTCCATTGGAGCCTCCCATACTAGACAAACTTATTCAAGCAAAGCTTGCAAAAACTAGGGAACAAAATGCAAGCTCTTCATAA 2301 0.3794 MGTHEMMPLDDKAKRMRELLSSFYSPDPSNSPNSYNTSSKYTSIDDINSISFDPDQYMNILAHKSNLEGLLQKHVQMAAEIKNLDTDLQMLVYENYNKFICATDTIKRMKSNILGMEGNMENLLEKIMSVQSRSDNVNTSLFDKREHIEKLHRTCNLLRKIQFIYDLPDRLVKCIKSEAYADAVRFYTGAMPVFKAYGDSSFQDCKRASEEAIAVIIKNLQEKVFSDSESMQVRAESAVQLKQLNFPVDNLKAKLLEKLEHSLKDVQLIPEEIGNASPSNHEAAICEFVEAIRAFRVIFPDSEEQLVKLARDLVTKHFVITEEYVKTQISGADLLAVLRVIWNDVLLMDKVSGEAALYDHSLEAAKVVIKLYVTSTFSYLLQDISDSLLKVVKRDGVEKYSLGVSLDASSKAILQGGKNFLVDINKILDDNSGILEKLRELIIDWVQEGFQEFFRQLEDQFLLLSGRNSSISTQNHGFPEEAQDDKALAGLVLVLAQLSSFIEKIAIPRITEESAISFSGDSVIGYEYGPAFIPREISQKFRSSGDKFLQQYISMKTQRVSLLLKKRFTTPNWVKHKEPREVHMFVDLFLQELEVIGNEVRQILAQGIQKHRRAASTGSTASSISNSLREEKMGRSNTQKARSQLLETHLAKLFKQKVQIFTKVEYTQGSVVTTIVKLGLKSLQEFVRLQTFNRSGLQQLQLDIQFLRTPLREIVEDEAAMDFLLDEVIVAVAERCLDPIPLEPPILDKLIQAKLAKTREQNASSS 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1383 766 Pfam Vps51/Vps67 48 132 - -
Lal3g1383 766 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 4 727 - -
Lal3g1383 766 MobiDBLite consensus disorder prediction 615 640 - -
Lal3g1383 766 Coils Coil 106 126 - -
Lal3g1383 766 PANTHER UNCHARACTERIZED 4 727 IPR014812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1383 Lal-Chr3 19717953 19728858 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1383 K20296 - gmx:100779149 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1383 3 19717953 19728858 Lal3g1383 3 19717953 19728858 ECH
Lal3g1383 3 19717953 19728858 Lal12g0524 12 3739221 3748259 PCT
Lal12g0524 12 3739221 3748259 Lal3g1383 3 19717953 19728858 PCT