Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0887 ATGGGAAACAGTGTTATGCTTGGGAGTACCATTCTCTTTATCTTTTTCTACATCTTCAACTTAGAATCCTTAGAGGCTCAAGTGGCTCCAGCTATTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAACAATTACTTGCTTCTTTCCATTGAAAAGGCAATTCTACCTCACTATGGCATTGATTTTCCAACAAAGAAACCCAATGGAAGGTTCAGCAATGGCAAGAATGCTGCAGATTTAATTGCTGAGAAATTGGGCGTGCCAACTTCACCACCTTACCTCTCCCTAATATCTAAGGTGAAGAACAACAGAAACGTATCCTTCTTGGATGGTGTTAGTTTTGCCTCTGGAGGTGCTGGAATATTTGATGGCAAGAATGATTTACAATCAATACCATTCACAAAACAAGTGGATTACTACTCACAAGTGCATGAACAAATGACCCAACAAGTAGGAGCACCAACTCTGCAGAAGCATCTATCCAAATCAATCTTCGCAGTTGTGATTGGAAGCAATGACCTCTTTGGTTATTTTAACTCAAAGGATCTTCAAAATAAAAGCACCCCACAACAATATGCAGATTCCATGGCTACCTCACTAAAAGTGCAACTACAGAGAGTATACAACTATGGTGCAAGGAAATTTGTGATTGCTGGTATCGGTTCAATTGGATGTTGCCCTACATTCAGGCTCAAGAACAAAACAGAATGTGCTCTAGAAGCCAATTTAATGTCAATTAGATATAATGATGGCCTCAAATCAATGTTGAAAGGATGGCAATTGGAGAACAATGACATAAGTTACACTTACTTTGATACCTATGTTGCACTCCAAGACATGATTCAATATCCAACTTCTTATGGATTTGTTGAGGTGAAAGCTGCTTGTTGTGGACTTGGAAAGCTTAATGCGGAGGTTCCTTGCCTACCAATATCAAATATTTGTTCCAATAGACAAGATCATGTTTTTTGGGATCCATTCCATCCTACAGAGGCAGCTGCTCGCATTTTTGTGGATAGAATTTTTAATGGATCTCCCAAATATTCATCTCCTATTAATATGAGACAACTACTAGCCGTTTGA 1089 0.3893 MGNSVMLGSTILFIFFYIFNLESLEAQVAPAIYVFGDSLVDVGNNNYLLLSIEKAILPHYGIDFPTKKPNGRFSNGKNAADLIAEKLGVPTSPPYLSLISKVKNNRNVSFLDGVSFASGGAGIFDGKNDLQSIPFTKQVDYYSQVHEQMTQQVGAPTLQKHLSKSIFAVVIGSNDLFGYFNSKDLQNKSTPQQYADSMATSLKVQLQRVYNYGARKFVIAGIGSIGCCPTFRLKNKTECALEANLMSIRYNDGLKSMLKGWQLENNDISYTYFDTYVALQDMIQYPTSYGFVEVKAACCGLGKLNAEVPCLPISNICSNRQDHVFWDPFHPTEAAARIFVDRIFNGSPKYSSPINMRQLLAV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0887 362 Gene3D SGNH hydrolase 22 348 IPR036514 -
Lal3g0887 362 CDD SGNH_plant_lipase_like 30 347 IPR035669 -
Lal3g0887 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 360 - -
Lal3g0887 362 Pfam GDSL-like Lipase/Acylhydrolase 32 342 IPR001087 GO:0016788
Lal3g0887 362 SUPERFAMILY SGNH hydrolase 32 344 - -
Lal3g0887 362 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 7 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0887 Lal-Chr3 8640727 8646631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0887 29 360 Acyl Lipid Metabolism Gene Families AT4G10950 34.118 4.77e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0887 - - gmx:100790145 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0887 3 8640727 8646631 Lal3g0887 3 8640727 8646631 ECH
Lal3g0887 3 8640727 8646631 Lal18g1571 18 17334743 17339724 LSH
Lal3g0887 3 8640727 8646631 Lal18g1571 18 17334743 17339724 PCT
Lal18g1571 18 17334743 17339724 Lal3g0887 3 8640727 8646631 PCT