Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1571 ATGGGTTACATGGTTTTCCTGAGATGCCCATTTATCTATATACATGTGTTTTTTTCCATCTTCATCAGCTTTTGTTTCTCAGAGGCTCAAGTTGTTCCAGCTCTTTATATGTTTGGAGATTCACTTGTAGACGTTGGAAATAACAATTACTTACCTCTTTCAATAGCAAAGGCTAACCATCGTCACTATGGTATTGACTTTGCAAATCACACACCAACTGGTAGATTTAGCAATGGCAAGAATGCTGCTGATTTTATTGCTGACAAATTGGGTTTACCAACTTCGCCACCTTACCTGTTCCTGATATCAAAGGACAACAAAAACAATGTGTCCTTCATGGATGGTGTTAGCTTTGCCTCCGCAGGTGCTGGAATATTTGATGGTACAGATCAACGTTATAGACAATCAATTCCACTGACAAAACAAGTGGATTACTTTGCATTGGTGAATGAAGAAATGACTCACCAAGTAGGAGCATCGGCTCTACTGAAGCATCTCTCAAAATCGATTTTCGGAGTAGTAATTGGCAGCAATGATATTTTTGGCTACTTTGACTCATCAAATCTTCGTAAGAAAAGCACTCCAACACAGTATGTGGATTCCATGCTTATCTCACTAAAAGTTCAACTACAGCGGTTATACGACCATGGTGCTCGTAAATTTGAGGTTGCTGGAGTTGGTGCACTTGGATGCTGCCCAAAATTTAGGCTCAAGAATCAAACAGAATGTTTTGAAGAAGCCAATTATTGGTCAATTAAATACAATGAAGGTCTTAAATCCATGCTGAAGAAATGGCAAATTGAGAATAAAGACATAAGATTCTCATACTTCGACACTTACGTTGCTGTCAGTGACCTTACTCAGAATCCAACTTCCTATGGATTTGCAGAGGTGAAAGCCGCTTGTTGTGGACTTGGTGAGCTGAAAGCCAAGGCTCCTTGCCTGCCAGTGTCTAGACTTTGTTCCAATAGACAAGACCACATCTTCTGGGATCAATTCCATCCGACGGAGGCTGCTTCTCGGATCTTTGCTGACAGAATTTTTAATGGTCCTTCAACTTACACATCTCCTATTACATTGAAACAGCTGGTAGCTGCCTGA 1101 0.4051 MGYMVFLRCPFIYIHVFFSIFISFCFSEAQVVPALYMFGDSLVDVGNNNYLPLSIAKANHRHYGIDFANHTPTGRFSNGKNAADFIADKLGLPTSPPYLFLISKDNKNNVSFMDGVSFASAGAGIFDGTDQRYRQSIPLTKQVDYFALVNEEMTHQVGASALLKHLSKSIFGVVIGSNDIFGYFDSSNLRKKSTPTQYVDSMLISLKVQLQRLYDHGARKFEVAGVGALGCCPKFRLKNQTECFEEANYWSIKYNEGLKSMLKKWQIENKDIRFSYFDTYVAVSDLTQNPTSYGFAEVKAACCGLGELKAKAPCLPVSRLCSNRQDHIFWDQFHPTEAASRIFADRIFNGPSTYTSPITLKQLVAA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1571 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 364 - -
Lal18g1571 366 SUPERFAMILY SGNH hydrolase 36 348 - -
Lal18g1571 366 Pfam GDSL-like Lipase/Acylhydrolase 35 347 IPR001087 GO:0016788
Lal18g1571 366 Gene3D SGNH hydrolase 23 352 IPR036514 -
Lal18g1571 366 CDD SGNH_plant_lipase_like 33 351 IPR035669 -
Lal18g1571 366 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 8 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1571 Lal-Chr18 17334743 17339724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1571 32 350 Acyl Lipid Metabolism Gene Families AT4G10950 36.308 8.37e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1571 - - gmx:100777307 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1571 18 17334743 17339724 Lal18g1571 18 17334743 17339724 ECH
Lal3g0887 3 8640727 8646631 Lal18g1571 18 17334743 17339724 LSH
Lal3g0887 3 8640727 8646631 Lal18g1571 18 17334743 17339724 PCT
Lal18g1571 18 17334743 17339724 Lal18g1571 18 17334743 17339724 PCT
Lal18g1571 18 17334743 17339724 Lal3g0887 3 8640727 8646631 PCT