Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0808 ATGTATAATCAATTCACACCCATTTTCCTTGTCCACCCAAAGTTCCTACCTTTGCACGCAATTCACCTTTCTCCTTCTTCTTCTCCTTCTTCTCCTTCTCCTCCTTCTTCTCCCATGGCTACTTGTGTTGATTCTTCCACCCCAGTTTCTCATAAGCCAAACATTTCCCAACCCGATGATCATTCCTTCAATTACATGAAATTCTGCCGACCCAGTTTCTCTGATCGTGTTACCTCTCTACCCATTTCCAAGAATCGTGAAAACGCTTTGCACACACGTATAATTTTGGAGGAAGTGGATCATGATAAGGACGGTGATGATGATGATGAGGTTGAGGTTGAAGGTGAAGATCTATGGCTAAAGATGCATGAGGAAGCAAAGTTAGATGTGGAACAGGAACCAGTTCTTTCTAGCTACTACTATGGTTCTATTTTGTCTCATAAATCATTGGAAAGTGCTTTGGCAAACCACATCTCAATCAAATTAAGCAGTTTGAGCCTTCCTAGTTGCACCCTTTTTGATATCTTTTTTGGGATCTTGGTGGAAAATCAAGATATCATGGATGCAGTGAAGGATGATTTAAGAGCAGTAAAAAAGAGAGACCCTGCTTGCATAAGCTACGTTCATTGTTTTTTAAATTTCAAAGGCTTCCTTGCATGCCAAGCTCATAGGGTGGCTCACAAATTGTGGCTACAAGGGAGAAAGGTTTTGGCACTCTTGATTCAGAACAAGGTTTCTGAAGTTTTCGCAGTGGATATCCATCCCGGAGCGAAGATTGGACGCGGAATTTTGCTGGATCATGCAACTGGGCTTGTAGTTGGAGAAACAGCAGTGATTGGAAAAAATGTATCAATTTTGCATAATGTTACTTTGGGAGGTACTGGAAAAGTTTGTGGGGATAGGCACCCTATGATTGGTGATGGGGTGCTGATAGGTACGGGAACTTGTATTTTAGGTAATATTAAGATTGGTGATGGGGCTAAGATTGGTGCTGGTTCAGTAGTGTTGAAGGAAGTGCCTCCAAGAACTACTGCAGTAGGGAACCCTGCAAAATTGGTTGGAGGGAAGTATAACCCTGTCAAAATGGATAAGATGCCAAGCTTCACTATGGACCATACTTTACATATTTGTGAGTGGTCTGATTAT 1146 0.418 MYNQFTPIFLVHPKFLPLHAIHLSPSSSPSSPSPPSSPMATCVDSSTPVSHKPNISQPDDHSFNYMKFCRPSFSDRVTSLPISKNRENALHTRIILEEVDHDKDGDDDDEVEVEGEDLWLKMHEEAKLDVEQEPVLSSYYYGSILSHKSLESALANHISIKLSSLSLPSCTLFDIFFGILVENQDIMDAVKDDLRAVKKRDPACISYVHCFLNFKGFLACQAHRVAHKLWLQGRKVLALLIQNKVSEVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGKNVSILHNVTLGGTGKVCGDRHPMIGDGVLIGTGTCILGNIKIGDGAKIGAGSVVLKEVPPRTTAVGNPAKLVGGKYNPVKMDKMPSFTMDHTLHICEWSDY 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0808 382 Gene3D Hexapeptide repeat proteins 252 373 - -
Lal3g0808 382 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 311 339 IPR018357 GO:0016740
Lal3g0808 382 CDD LbH_SAT 249 349 IPR045304 -
Lal3g0808 382 SMART SATase_N_2_a 118 222 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lal3g0808 382 MobiDBLite consensus disorder prediction 24 58 - -
Lal3g0808 382 PANTHER SERINE ACETYLTRANSFERASE 39 382 - -
Lal3g0808 382 Pfam Serine acetyltransferase, N-terminal 118 222 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lal3g0808 382 TIGRFAM cysE: serine O-acetyltransferase 190 351 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lal3g0808 382 Pfam Bacterial transferase hexapeptide (six repeats) 303 336 IPR001451 -
Lal3g0808 382 SUPERFAMILY Trimeric LpxA-like enzymes 117 353 IPR011004 -
Lal3g0808 382 PANTHER SERINE ACETYLTRANSFERASE 39 382 - -
Lal3g0808 382 MobiDBLite consensus disorder prediction 37 58 - -
Lal3g0808 382 Gene3D serine acetyltransferase, domain 1 104 251 IPR042122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0808 Lal-Chr3 7359160 7360419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0808 107 372 Miscellaneous Gene Families AT2G17640 51.880 7.63e-88 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0808 K00640 - gmx:100779106 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0808 3 7359160 7360419 Lal3g0808 3 7359160 7360419 ECH
Lal3g0808 3 7359160 7360419 Lal22g0052 22 313154 314002 PCT
Lal22g0052 22 313154 314002 Lal3g0808 3 7359160 7360419 PCT