Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0052 ATGCCACTTTCCCATAATCTAAACAGGTCTCAAACCCATTATCATCATTCATTGCCCTTTTGCAAATATCAGGTCAACACATTAAACACTCACACTGTTGTAGATGAAGTTGACCATGAAGACGTTAGTGAACATAGTATATGGCTTAAGATGCAAGATGAAGCTAGAATTGGTGTCACTGTGGAACCTATTTTATCTAGTTACTATCATAGTTCGATTTTGTCACAAAAATCATTAGGAAGTGCTTTGGCTAATCACCTTGCTATTAAGCTGAGTAGTGCAAAACTTCCAAATGGTCCACTCTTTGATCTTTTTAAGGGAATTCTGGAAGGTGATGATTTGAACATCATGGATGCTGTGAAGGATGATTTGAGAGCAGTGAAGGAAAGAGACCCTGCTTGTATAAGCTATGTGCATTGTTTCATGAATTTCAAAGGGTTTTTAGCATGCCAAGCACATAGAGTGGCTCACAAATTGTGGTTACAAGGAAGGAAGGTTTTGGCAGTTATGATTCAGAACCGAGTTTCAGAAGTATTGGGAGTGGATATTCATCCAGGAGCGAAGATTGGAAGTGGGATATTACTTGATCATGCAACTGGTATTGTTGTTGGAGAAACTGCTGTGATTGGAAATGATGTGTCAATATTGCATAATGTAACATTGGGGGGTAATGGTAAGATAAGTGGGGATAGACACCCTAAGATTGGTGATGGTGTGTTGATTGGTGCAGGAACTTGTATTTTGGGGAACATTCAAATTGGTGATGCTGCTAATATTGGTCCTGGTTCTGTAGTCATTAAGGATGTGCCTCCAAGGACTACTGTCCTTGGGAACCCAGCTCATATTTAA 849 0.3958 MPLSHNLNRSQTHYHHSLPFCKYQVNTLNTHTVVDEVDHEDVSEHSIWLKMQDEARIGVTVEPILSSYYHSSILSQKSLGSALANHLAIKLSSAKLPNGPLFDLFKGILEGDDLNIMDAVKDDLRAVKERDPACISYVHCFMNFKGFLACQAHRVAHKLWLQGRKVLAVMIQNRVSEVLGVDIHPGAKIGSGILLDHATGIVVGETAVIGNDVSILHNVTLGGNGKISGDRHPKIGDGVLIGAGTCILGNIQIGDAANIGPGSVVIKDVPPRTTVLGNPAHI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0052 282 TIGRFAM cysE: serine O-acetyltransferase 120 280 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lal22g0052 282 SUPERFAMILY Trimeric LpxA-like enzymes 47 281 IPR011004 -
Lal22g0052 282 CDD LbH_SAT 179 279 IPR045304 -
Lal22g0052 282 PANTHER SERINE ACETYLTRANSFERASE 14 281 - -
Lal22g0052 282 SMART SATase_N_2_a 47 152 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lal22g0052 282 Gene3D Hexapeptide repeat proteins 182 282 - -
Lal22g0052 282 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 241 269 IPR018357 GO:0016740
Lal22g0052 282 Pfam Serine acetyltransferase, N-terminal 47 152 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lal22g0052 282 Pfam Bacterial transferase hexapeptide (six repeats) 232 266 IPR001451 -
Lal22g0052 282 Gene3D serine acetyltransferase, domain 1 30 181 IPR042122 -
Lal22g0052 282 PANTHER SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC 14 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0052 Lal-Chr22 313154 314002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0052 18 282 Miscellaneous Gene Families AT2G17640 50.376 6.92e-83 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0052 K00640 - jre:108985161 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0052 22 313154 314002 Lal22g0052 22 313154 314002 ECH
Lal3g0808 3 7359160 7360419 Lal22g0052 22 313154 314002 PCT
Lal22g0052 22 313154 314002 Lal3g0808 3 7359160 7360419 PCT