Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0641 ATGGCTCCTGTACCTATTTCTCTTATTAACGTTGGCCACATTGATGATGTTCAAGAACTAAGAAAAACTAAGCCAAAGACAATTCCTCAAAGATTTGTAAGACACATGACAGAAAGACCAACACTTTCTACATCTGTGTCACAACAAAACAGTGACATGCCAGTCATTGATTTCTCTAAGCTTAGCAAAGGTAACAAAGATGAAGTTCTCACTGAACTTTTCAACCTTGCAAGTGCTTGTGAGGAGTGGGGATTTTTTCAGGTAATTAATCATGAGGTGGACCTCAATTTGCTGGAGAGTACAGAGAAGATTATCAAGGATTTTTTCATGCTACCTTTGGAAGAGAAACAGAAATATCAAATGGTTCCAGGTACAGTTCAAGGTTATGGACAAGCTTTTGTTTTCTCAGAAGACCAGAAGTTGGACTGGTGCAACATGTTTGCTCTTGCAATTGAACCTCACTATATGAGGTGTCCAAATCTATGGCCAAAGAGACCAGAAAGATTTAGTGAAACAGTGGAAGTGTACTCAAGAGAAGTAAGGAAATTATGCAAGAATCTGCTAAAATACATAGGTCTAAGTCTAGAGTTGGAAGGGGATACCTTTGAGAATATTTTTGGTGAGGCAGTACAAGCAATGAGGATGAATTATTACCCACCATGTTCAAGACCTGACCTTGTGTTTGGTCTTAGCCCCCATTCAGATGGAAGTGCCCTTACTGTGCTGCAACAAGCAAAAGGAAGCCCAGTGGGACTTCAAATACTCAAGGACAGTAAATGGGTGCCTGTTCAACCAATTCCAAATGCTCTTGTCATCAACATTGGAGACACAATAGAAGTTCTTACAAATGGAAAATACAAGAGTGTGGAGCATAGAGCTGTGGCTCATGAAGAGAAAGATAGACTATCAATTGTAACATTTTATGCTCCTAGCTATGAAGTAGAGCTTGGTCCAATGCAGGAACTTGTAGATGAAAAGCATCCATGCAAGTATAAAAGATACAATCATGGAGAGTATAGCAAGCACTATGTAACAAACAAGTTGCAAGGAAAAAAGACATTGGACTTTGCCAAAATCCAAACCAATTAA 1089 0.3912 MAPVPISLINVGHIDDVQELRKTKPKTIPQRFVRHMTERPTLSTSVSQQNSDMPVIDFSKLSKGNKDEVLTELFNLASACEEWGFFQVINHEVDLNLLESTEKIIKDFFMLPLEEKQKYQMVPGTVQGYGQAFVFSEDQKLDWCNMFALAIEPHYMRCPNLWPKRPERFSETVEVYSREVRKLCKNLLKYIGLSLELEGDTFENIFGEAVQAMRMNYYPPCSRPDLVFGLSPHSDGSALTVLQQAKGSPVGLQILKDSKWVPVQPIPNALVINIGDTIEVLTNGKYKSVEHRAVAHEEKDRLSIVTFYAPSYEVELGPMQELVDEKHPCKYKRYNHGEYSKHYVTNKLQGKKTLDFAKIQTN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0641 362 PANTHER PROTEIN SRG1 10 361 - -
Lal3g0641 362 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 310 IPR005123 -
Lal3g0641 362 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 164 IPR026992 -
Lal3g0641 362 SUPERFAMILY Clavaminate synthase-like 15 351 - -
Lal3g0641 362 Gene3D - 12 351 IPR027443 -
Lal3g0641 362 Pfam 2OG-Fe(II) oxygenase superfamily 211 310 IPR044861 -
Lal3g0641 362 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0641 Lal-Chr3 4973767 4975926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0641 17 359 Glycosyltransferase AT5G59530 34.366 4.39e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0641 - - gmx:100785152 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0641 3 4973767 4975926 Lal21g1249 21 15581831 15590597 LSH