Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1249 ATGTTCAATAGCCCACCAGATTGGCCTGAACCAATAATCAGGGTTCAATCTTTATCTCAAACCTGCATAGATTCAATCCCTGAAAGATATATCAAGTCCCCAAATGAAAGACCATCCATAAACTCTTCTTTTAATGATGCAAATATTCCAATCATTGACCTTAAAGATCTATATGGTGATGACAAAGATGCAAAACTTTCTATCCTTAAGCAAATTTCTGAGGCTTGCAATGAATGGGGTTTCTTCCAAATAGTGAATCATGGGGTTAGTCCAGATTTGATGGACAAAGCTAGAGAAACATGGCGTCAATTTTTTCACTTACCTATGGAGATGAAACAGAAATTTGCAAATTCTCCTAAGACTTATGAAGGATATGGTAGCAGACTTGGAATTGAGAAAGGTGCTATTCTTGATTGGAGTGATTACTATTATCTTCACTACCTTCCCTTGTGCCTTAAAGATCATAACAAATGGCCTGATTTACCTCTATCTTGCAGGGAAGTATTTGATGATTATGGGAAAGAAGTAGTGAAGCTAGGTGGTAGATTGATGAAGGCACTATCCATAAACCTTGGATTGAGAGAGGATTTTCTTCAAAATGCTTTTGGAGGTGAAGATATTGGGGCATGTCTAAGAGTGAATTTTTACCCAAAGTGTCCAAAACCAGATCTAACATTGGGTTTGTCTTCACATTCTGACCCAGGAGGCATGACTATGTTGCTTCCAGATGATCAAGTTTCTGGTCTTCAAGTTAGAAAATCTGATAATTGGATTACAGTGAAGCCTCATCCCTATGCCTTCATTGTCAATATTGGTGACCAAATACAGGTTTTAAGCAATGCAATGTACAAGAGTGTGGAGCATAGAGTAACAGTAAATTCAGATAAAGAAAGAGTTTCACTTGCTTTCTTCTACAATCCCAAAAGTGATATACCAATTGAGCCAGCAAAAGAATTGGTAACATTGGACAAACCTGCACTCTACCCAGCAATGACCTTTGATCAATACAGGCTCTTCATTAGACTGAGAGGACCTCGCGGCAAATCTCAAGTTGAATCATTAAAATCTCGAACATCATCGACCATCATTAATATTAAATAA 1101 0.376 MFNSPPDWPEPIIRVQSLSQTCIDSIPERYIKSPNERPSINSSFNDANIPIIDLKDLYGDDKDAKLSILKQISEACNEWGFFQIVNHGVSPDLMDKARETWRQFFHLPMEMKQKFANSPKTYEGYGSRLGIEKGAILDWSDYYYLHYLPLCLKDHNKWPDLPLSCREVFDDYGKEVVKLGGRLMKALSINLGLREDFLQNAFGGEDIGACLRVNFYPKCPKPDLTLGLSSHSDPGGMTMLLPDDQVSGLQVRKSDNWITVKPHPYAFIVNIGDQIQVLSNAMYKSVEHRVTVNSDKERVSLAFFYNPKSDIPIEPAKELVTLDKPALYPAMTFDQYRLFIRLRGPRGKSQVESLKSRTSSTIINIK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1249 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 160 IPR026992 -
Lal21g1249 366 Gene3D - 11 340 IPR027443 -
Lal21g1249 366 Pfam 2OG-Fe(II) oxygenase superfamily 209 307 IPR044861 -
Lal21g1249 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 206 307 IPR005123 -
Lal21g1249 366 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 355 - -
Lal21g1249 366 SUPERFAMILY Clavaminate synthase-like 12 340 - -
Lal21g1249 366 PRINTS Isopenicillin N synthase signature 72 89 - -
Lal21g1249 366 PRINTS Isopenicillin N synthase signature 267 293 - -
Lal21g1249 366 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 9 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1249 Lal-Chr21 15581831 15590597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1249 15 355 Glycosyltransferase AT5G59530 31.161 1.12e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1249 - - gmx:100814471 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1249 21 15581831 15590597 Lal21g1249 21 15581831 15590597 ECH
Lal3g0641 3 4973767 4975926 Lal21g1249 21 15581831 15590597 LSH