Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0544 ATGTGTTCAAATCTGGAACCAGTGCCAATTACACCCCAAAAACATGACCCAGCATGGAAGCATGTTCAAATGTTTAAGAATGGGGACAAGGTGATATTGAAATGCATATATTGTCTTAAGATGTTCAAGGGTGGTGGAATTCATAGGATTAAGGGACACCTTGCCTGTCAGAAGGGTAATGCATCCGCTTGCTGTAGGGTACCCCATGATGTTATGCTTAGTATGCAGCAGAGTTTGAATGGGGTTGTGATTAAAAAGAGGAAGAAGCAAAGAATTGAGGAAGATATTATGAGTGTTACTCCTTTAGCTTCTGCTGCCAACAACAACACTATTGTCAATCATGTGGATGTGAATGAGGGATTTCAGTCCATTGGAGTACATAATTCAGCGGAACACAATTCGAATATGTTAATAAATCATGTTGATGGAGTTAGTAAAGTTGTGGAAAGAAGGAAGAAATTGAGAGCCAGCAAGAATTGTACAAAATCTGAGGCTGCTGTTATTGCTACTGAGAAAAATACGTTGTTTCCCAAGAAGGTGGACAGCCGCATTCACATGGCAATAGGTCGGTTTTTGTATGATATTGGTGCACCTTTTGATGCTGTGAACTCGATCTATTTTCAGGAAATGGTGGAAGCAATTGCTTCCGGGGGTTCTGGTTTTGAACGTCCCTCACATCATGAAATTCAGGGGTGGGTCCTGAGAAACTCGGTGCAAGAAGTGAAGAATGATTTAGATAGGTGCAAGATGACATGGGGGAGGACTGGTTGTTCTATTTTGGTTGACCAATGGAGTACGAACTCGGGTAGAATAGTGCTATGTTTTCTAGTGTATTGTCCCGAAGGAATAGTCTTTTTGAAATCCGTGGATGCAACTGAGATTGTGGCTTCCCCGGAATATTTATTTGAGTTGATAAAACAGGTAGTAGAAGAAGTTGGAGTCGGGCAAGTACTGCAAGTGATTACATCTGGTGAAGAACAATATGCTATTGCTGGGCGACAGTTGACGGATACTTTTCCTACCCTTTATTGGAGTCCTTCTGCTACTCATTGCATTAATTTGATACTCGAAGATATTGGAAATCTTGAGTGGATTAGTGCAGTGATTGACCAAGCTAGATCTGTAACAAGATTTGTCTACAATCATAGTGCAGTCTTGAATATGGTTAGAAGGTATACTTTAGGGAATGATATTGTGGATCCTTCTACTTCGCGCTTTGCGACAAACTTTACCTCATTGAAGCGAATGGTTGATCTTAAACATAATTTACAGGCTATGGTCACTTCTCATGAGTGGATGGATTGTCCATATTCAAAGAAAACACCAGGTCTAGAAATGTTAGATTGCTTAAGTAATCAAACATTTTGGTCCTCATGTGAAATGATAGTTCGGCTAACAGCGCCTCTCTTGTGCGTTCTGAGAATAGTTGCTAGTGAGATGAGACCTGCAATGGGATACATTTATGCTGGAATGTACAGGGCAAAAGAAGCAATTAAGAAAGAACTTGTTAAGAGGGAGGATTATATGGTGTACTGGAATATTATACATCACAGATGGGAAAGGCTGTGGTTTCATCCTCTTCATGCTGCAGGCTTTTTCCTTAATCCTAAGTTTTTCTATAGTATTGAAGGGGATATACACAACGAAATTCTCTCCGGGATGTTCGATTGCATAGAGAGGTTGGTACCTGATACAAGAGTCCAAGATAAAATTATCAAAGAGATAAACTTATACAAGACAGCTGCAGGAGATTTTGGGAGAAAGATGGCTGGAAGAGCAAGAGATAATTTGCTTCCTTCTGAATGGTGGTCAACGTATGGAGGAGGCTGCCCTAACTTGTCGCGTTTAGCAATTCGTATTCTCAGTCAAACATGCAGTGTGGTGTCTTGCAAGAGAAACCAAATTCTTTTTGAACAAACAATGAATACAAGGAATCATATAGAGTGCCAACATCTTACGGATCTAGTCTTTGTTCATTACAACTTACGGTTGAGACAAATGCTTATGAGTAAACAAGACTTTAATGATCCCTTGTCATTTGACTACGTTAGTAATGTTGATGATTGGATCGGGGCAAAGGATTTATACGAAGAAGAGTACAGCTCGAATGGGATGGCACTGGATCCAGCTTCTGTAAACACAATGCTTTTAAGGCCTTTAAATGATGAAGCTGAAGAATTGGGTGAAGGATTTGATGATCATGAGATTTTCAGTTGTATGAAAGACGGCGAGGATGAAAATACTCGAGATAAGCCGGTAAACCATTAA 2268 0.4012 MCSNLEPVPITPQKHDPAWKHVQMFKNGDKVILKCIYCLKMFKGGGIHRIKGHLACQKGNASACCRVPHDVMLSMQQSLNGVVIKKRKKQRIEEDIMSVTPLASAANNNTIVNHVDVNEGFQSIGVHNSAEHNSNMLINHVDGVSKVVERRKKLRASKNCTKSEAAVIATEKNTLFPKKVDSRIHMAIGRFLYDIGAPFDAVNSIYFQEMVEAIASGGSGFERPSHHEIQGWVLRNSVQEVKNDLDRCKMTWGRTGCSILVDQWSTNSGRIVLCFLVYCPEGIVFLKSVDATEIVASPEYLFELIKQVVEEVGVGQVLQVITSGEEQYAIAGRQLTDTFPTLYWSPSATHCINLILEDIGNLEWISAVIDQARSVTRFVYNHSAVLNMVRRYTLGNDIVDPSTSRFATNFTSLKRMVDLKHNLQAMVTSHEWMDCPYSKKTPGLEMLDCLSNQTFWSSCEMIVRLTAPLLCVLRIVASEMRPAMGYIYAGMYRAKEAIKKELVKREDYMVYWNIIHHRWERLWFHPLHAAGFFLNPKFFYSIEGDIHNEILSGMFDCIERLVPDTRVQDKIIKEINLYKTAAGDFGRKMAGRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTCSVVSCKRNQILFEQTMNTRNHIECQHLTDLVFVHYNLRLRQMLMSKQDFNDPLSFDYVSNVDDWIGAKDLYEEEYSSNGMALDPASVNTMLLRPLNDEAEELGEGFDDHEIFSCMKDGEDENTRDKPVNH 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0544 755 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 728 - -
Lal3g0544 755 SUPERFAMILY Ribonuclease H-like 257 664 IPR012337 -
Lal3g0544 755 ProSiteProfiles Zinc finger BED-type profile. 13 71 IPR003656 GO:0003677
Lal3g0544 755 PANTHER OSJNBA0013A04.12 PROTEIN 7 728 - -
Lal3g0544 755 Pfam Protein of unknown function (DUF 659) 224 375 IPR007021 -
Lal3g0544 755 Pfam hAT family C-terminal dimerisation region 590 662 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0544 Lal-Chr3 4053103 4057669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0544 - - aprc:113850304 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0544 3 4053103 4057669 Lal3g0544 3 4053103 4057669 ECH
Lal3g0544 3 4053103 4057669 Lal5g1171 5 14431841 14436269 LSH