Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0052 ATGCCACAAATACATACACAGTCAACTTTCTCCTTTATTACTAATTTACTACTATATATATATATATATGTATGTATATCAGTTTCTTCTCAAACCAATCTGTTAGAGATGGATTATCAGTATATTGTGGCAGGAGGGATTTTAGCTTCTACTTTGGTTCTTCTTTTGAATCTGTTTGGTTCTGCAGCAAAGAAGAAGGCCACAGGTTCATTACATGCAGAAGAAATTAATAATGATTGTGCAAAGACGTCATCAAAAAATGGAACATGCCCTCAAGAAGTGGTAGAAACCACGGACGTCATCATTGTTGGTGCTGGTGTTGCTGGTGCAGCCCTTGCTTACACACTTGGCAAGGATGGAAGGAGAGTGCATGTTATTGAAAGGGACTTGAATGAGCCAGACAGGACTGTGGGTGAATTGCTACAACCTGGAGGTTATCTCAAGTTAACTGAGTTGGGTCTTGAGGATTGTGTGGATAAAATTGATGCTCAGCAAGTCTATGGCTATGTTCTCTATAAGGATGGAAAACATGTTAAGACTTCTTTTCCCTTGGATAAATTTGGCTCTCATGTTTCTGGTAGAAGCTTTCACAATGGTCGTTTCATACAGAGAATGAGACACAAGGCTCTATCTCTTCCAAATGTAAAATTAGAACAAGGAACCGTCACATCTCTATTGGAAGAAAAGGGAATCATCAAAGGAGTGCACTATAAAACCAAGTGTAGGGAAGAGCTCATAGCAAAGGCTCCCCTTCAATATGCGTCACCCTTTAACTGGTGGAGGAATGACTGA 792 0.3977 MPQIHTQSTFSFITNLLLYIYIYVCISVSSQTNLLEMDYQYIVAGGILASTLVLLLNLFGSAAKKKATGSLHAEEINNDCAKTSSKNGTCPQEVVETTDVIIVGAGVAGAALAYTLGKDGRRVHVIERDLNEPDRTVGELLQPGGYLKLTELGLEDCVDKIDAQQVYGYVLYKDGKHVKTSFPLDKFGSHVSGRSFHNGRFIQRMRHKALSLPNVKLEQGTVTSLLEEKGIIKGVHYKTKCREELIAKAPLQYASPFNWWRND 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0052 263 Pfam FAD binding domain 98 174 IPR002938 GO:0071949
Lal3g0052 263 Gene3D - 92 249 IPR036188 -
Lal3g0052 263 PANTHER SQUALENE MONOOXYGENASE 37 252 IPR040125 GO:0004506|GO:0016126
Lal3g0052 263 PANTHER SQUALENE MONOOXYGENASE-RELATED 37 252 - -
Lal3g0052 263 SUPERFAMILY FAD/NAD(P)-binding domain 98 240 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0052 Lal-Chr3 308503 310901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0052 26 251 Miscellaneous Gene Families AT2G22830 60.526 1.03e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0052 K00511 - gmx:100796946 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0052 3 308503 310901 Lal3g0052 3 308503 310901 ECH
Lal15g0564 15 3905803 3909811 Lal3g0052 3 308503 310901 PCT
Lal3g0052 3 308503 310901 Lal15g0564 15 3905803 3909811 PCT