Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1908 ATGTTGGGTCAGAAGCAATCAGAGGAAGCAATAGTGAGCACAAACTTCAGTGAGACAGAGAATGAAGGAAGTGTTAATGGAGCAATGGAAGTAGAGAAGGAACAAGACCAATCCATGTTCAATGTCAAAAGCTTCCTTTGGCATGGTGGTTCTGTATGGGATGCATGGTTCAGCTGTGCTTCAAATCAAGTGGCTCAAGTGCTTTTGACATTACCATATTCTTTCTCTCAACTTGGCATGCTATCAGGAATCTTGCTTCAGATATTCTATGGATTATTGGGAAGTTGGACAGCTTATTTAATCAGTGTTCTCTATGTTGAGTATAGGACTAGAAAGGAAAAGGAAAATGCTAGTTTCAAGAACCATGTCATTCAGTGGTTTGAAGTGCTTGATGGGTTATTAGGTTCATCTTGGAAAGCAATAGGACTTGCCTTTAACTGTACTTTTCTTCTCTTTGGATCTGTGATACAGCTTATAGCATGTGCTAGTAATATCTACTACATCAATGATAAATTGGACAAAAGAACTTGGACTTATATATTTGGAGCATGTTGTGCTACAACTGTGTTCATTCCTTCATTTCACAATTACCGAATTTGGTCATTTTTGGGACTTGGAATGACTACTTATACTGCTTGGTATATGGCTATAGCAGCTCTACTTCATGGACAGGTAGAAAATGTGTCACACACTGGTCCAAAGAAGTTAGTGTTGTACTTCACAGGAGCCACCAATATACTATACACTTTTGGTGGACATGCAGTGACTGTAGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTCAAATATATATATTTGATGGCAACATTATATGTTTTTACACTAACACTTCCTTCTTCTGCTGCTGTTTATTGGGCTTTTGGTGATGAGTTGCTTAATCATTCCAATGCCTTCTCTCTTCTCCCTAAGAATAGGTTTCGTGATGCTGCTGTAATACTCATGCTTATTCATCAGTTTATCACATTTGGGTTTGCATGTACTCCATTATACTTTGTGTGGGAGAAGGTAATTGGAATGCATAACACAAGAAGCATTTGTGTAAGGGCACTAGCAAGGTTACCAGTGGTGATACCAATATGGTTCTTAGCTATAATATTCCCATTCTTTGGACCAATTAACTCAGCTGTTGGTGCTTTACTTGTTAGCTTCACTGTCTATATCATCCCTTCTTTAGCACATATGCTCACTTATAGAAAAGCCTCTGCAAGACAGAATGCTGCTGAGAAGCCTCCTTTCTTTATGCCAAGCTGGACTGCAATGTATGTGATCAATGCATTCATTGTGGTGTGGGTTTTAGTGGTTGGATTTGGCTTTGGAGGATGGGCCAGCATGACCAACTTCATCAGGCAAATTGACACTTTTGGCCTCTTTGCCAAGTGCTACCAATGCCATTCCCCAACTCCACCATCCGTCGCGGCGGCGCCATCACCACCCCTTCATCATTGA 1470 0.4034 MLGQKQSEEAIVSTNFSETENEGSVNGAMEVEKEQDQSMFNVKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLLGSWTAYLISVLYVEYRTRKEKENASFKNHVIQWFEVLDGLLGSSWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYMAIAALLHGQVENVSHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVFTLTLPSSAAVYWAFGDELLNHSNAFSLLPKNRFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHNTRSICVRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFMPSWTAMYVINAFIVVWVLVVGFGFGGWASMTNFIRQIDTFGLFAKCYQCHSPTPPSVAAAPSPPLHH 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1908 489 PANTHER AUXIN INFLUX TRANSPORTER 3 474 - -
Lal2g1908 489 Pfam Transmembrane amino acid transporter protein 48 441 IPR013057 -
Lal2g1908 489 PANTHER OS05G0424000 PROTEIN-RELATED 3 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1908 Lal-Chr2 21327288 21332990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1908 1 489 Organic Solute Cotransporters AT2G21050 75.869 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1908 K13946 - gmx:100810532 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1908 2 21327288 21332990 Lal2g1908 2 21327288 21332990 ECH
Lal2g1908 2 21327288 21332990 Lal1g2226 1 24246974 24254935 LSH
Lal2g1908 2 21327288 21332990 Lal14g0219 14 2491746 2499389 PCT
Lal14g0219 14 2491746 2499389 Lal2g1908 2 21327288 21332990 PCT