Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2226 ATGTTGGGTCATAAGCAATCAGAGGAAGCAATAGTGAGCAATAACATGAATGAGACAGAGAATGAAGGAAGTGTTGGTGGAGGAATGGAAGTAGAGAATAAGGAACAAGACCAATCTATGTTCAATGTCAAAAGTTTTCTCTGGCATGGTGGTTCTGTATGGGATGCATGGTTCAGCTGTGCTTCAAATCAAGTTGCTCAAGTGCTTTTGACACTTCCATATTCTTTCTCTCAACTTGGTATGCTATCAGGAATCTTGCTTCAGATATTCTATGGACTCTTGGGAAGTTGGACAGCTTATTTAATCAGTGTCCTCTATGTGGAGTATAGGACTAGAAAGGAAAAGGAAAATACCAGTTTCAAAAACCATGTCATTCAGTGGTTTGAAGTTCTTGATGGGTTATTGGGTTCATATTGGAAAGCAATAGGACTTGCCTTTAACTGCACTTTTCTCCTCTTTGGATCTGTGATACAGCTTATAGCATGTGCAAGTAACATCTACTACATCAATGATAAATTGGACAAAAGGACTTGGACTTATATATTTGGAGCTTGTTGTGCTACAACTGTGTTCATTCCTTCATTTCACAATTACCGAATTTGGTCTTTTTTGGGACTTGGAATGACTACTTACACTGCTTGGTATATGGCTATAGCAGCTCTTGTTCATGGCCAGTTCAAATCATGGTATCTGCCTGAAAGTACGGCTGCGTATATCTACCCTTCCGATACCCCGGTAGAAAATGTGACTCACACAGGTCCAAAGAAGCTAGTTCTGTACTTCACTGGAGCCACCAACATACTATACACATTTGGTGGACATGCAGTTACTGTGTAA 837 0.4002 MLGHKQSEEAIVSNNMNETENEGSVGGGMEVENKEQDQSMFNVKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLLGSWTAYLISVLYVEYRTRKEKENTSFKNHVIQWFEVLDGLLGSYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYMAIAALVHGQFKSWYLPESTAAYIYPSDTPVENVTHTGPKKLVLYFTGATNILYTFGGHAVTV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2226 278 PANTHER OS05G0424000 PROTEIN-RELATED 3 278 - -
Lal1g2226 278 PANTHER AUXIN INFLUX TRANSPORTER 3 278 - -
Lal1g2226 278 Pfam Transmembrane amino acid transporter protein 49 277 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2226 Lal-Chr1 24246974 24254935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g2226 5 278 Organic Solute Cotransporters AT2G38120 76.364 9.90e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2226 K13946 - gmx:100810532 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2226 1 24246974 24254935 Lal1g2226 1 24246974 24254935 ECH
Lal2g1908 2 21327288 21332990 Lal1g2226 1 24246974 24254935 LSH
Lal1g2226 1 24246974 24254935 Lal14g0219 14 2491746 2499389 PCT
Lal14g0219 14 2491746 2499389 Lal1g2226 1 24246974 24254935 PCT