LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal2g1032	ATGGGTTCCAATGCATCAGAAGAAGAAGAAGAGGGTAAAATCCCAGTCTTCACTGTTCTGAAAAACGATGCAATTCTCAAGAACATTTTCATTCTCAACAAACCCACACAACCCAATGATTCTTCTTCTGTTCTTAAAGATCAAGAGGACATTCTCATCGTTGGGCGCCACCCTGACTGTGACATCATGCTTACGCATCCTAGCGTCAGCAGATTCCATCTCCACATACGATCTAAACCCTCTTCACAATTCCTCTCACTCATCGACTTATCTTCCGTGCACGGTACTTGGGTTTCAGGGAGGAAGTTGGAGCCTGGGGTGAGTGTGGAGATGAAAGAAGGCGACACCTTGAGGATTGGGGCTTCAAGTAGGGTTTATTGCCTGCATTGGATTCCAATTAGTCACGCTTATGACTTGGAAAATCCCTTTGTGTCGGAGCTTGATGTCATTTTGGAACCTCAAAATGAAGAAGAACTAGTTCAGAACTTGAATTGTTGTCCAGATGAAATGGAAGAAATTCCTTCGGAAGATTCGATTCTGGAGTGTGTAAAAATGTTATTCTTTGAGAATTTGGAAGGGAGTGTGGAAAAGGAGACTTCAGCTGCACCTCCTATGGCAGAAGACATATTTTATTTTTGTTGTCCAGAAGAAAGAAAGAGCAAGCCAATAGATGGAACCTTTGAAGTACAAGTGGAGCCTTGTGGAACTGAAACATCATTTTCGCCTACGACCTCTGATTGGGAAAACAAACTGTATGGCTCTCTAAACCAAGAACTAACTGTTAAAAAGGAGATTCCATCTGCACCTCCTGTGCTAGAAGGCATCATTCATTTTTGTTGTGAGGAAGAAATGAAGAGTCAACCCAAAGATGAAATGCTTGGAGTCCCAAGTGACCCTTTTGGGATTGAAAATGAATTGTGTGACTCTTTGAACCAGGTTCTACCACTACTTTATGTGGAACCATTTGCTGAAAGTGAAGGCATCATTTCTTTTTATTGTGAGGAAGAAATGAAGAGTCAATCCAATTTATCCAAAGATGAAATGCTTGGAGTCACGAATGACACTTTTGGGACTGAAATTGATCTGTGTGACTCTCTAAACCAAGTTCTGCCATTACCTTATGTGGAATCATTTGGTGAAAGTGATAGCACATTGACTTTGCCGATTGTGGAAGCTGTCCAGGGTACCAAAATCCAGCAATTTCATACACCACCAGATACATTTACTTCACCATTACCACCTGATCAAGAGGATTTATTTGAAAAGTGTTACTCCAGCTTTCCCATAAATACTGATCTTGCATCTTTTGGTAAAGAAAGTGCAGCTGAGGCTATAAATGTAATACCTGAAGAATCTGAATTTGGATGTACAGTCAGAGAAGATGAACAGTTTAGAGATATTATTACTACTGAAGGAACTTTTAATTCTGAGAACATTTTTTTGCCAGTTGAGGAAGTTGTCTGTGATACCATATGTCAACAAATCAAGGTTGTCAAAGAAATTGTGGATTCAATGAGTGATGGACAAAAGTCGAAGTCGGAACTGAATGCTAAACATTGTTCACTGGATGAAATAGTTCATGATATCGGAAACAAGTGCACTGGTAGCATCTGTCCCATACCACTTCAGATAGAGTCAGTGAATTTGCCACCTCAGGAAGCTGTTTTGGGAATTACCATAGAGAACCACATCCCACAATCTGATATGGAGTTCCTTGAAAGCCACGGAGAACCAATAGAGAAAAAATCAAGTATTGGTAATATCTGGTTAAGAAGAATTAAAGCTGCTAGTGCTCCTCAGATTCGAACCAGCAAGAGTACATTTAAGAGCATGGTTGAAGCTGACACTAAAGTTGCAGTCAGTAATGTGAAGGATACCAAAAAGAAAACAATCCCAAAGGACATTTTCTCTGTTTTGGATGGGCAAGAAGAAGAGGAAGAAATCTTCACTCCAGATAAGGAAAACTTCAGCCCAAATACCCTTCAACTGCGGTTTCTGAAAAAGAAAGGTAAGCTACAAGAATTTAAACATTCTAAATCAAAAAGGTCACACAATTTAAAGGATACTTTTAGTTCTGACATCTATCCAAATGAAAGCATAAGCCCTAATCCAATCAAAGAGAATAGGAAGGAGAATAAGACAATCCCAAAATATCTTTTCTCTGTTTTGGATGAGGAAGAAGATATTTTCACTCCAGATAAAGAAAACTTCACCCCAGACACCCTTCGATTGCGGCTTCTGAAAAAGAAGGGTGAGCGAGCTGAAACTAAATGTTCCAAGTGGTCACAAAATTCAAAGGATAATTTCAGTCCCAACATCTATCCAGATGAAAGAATAAGCTCCACTTCAAACAAAGAGAATCAGACTCTTAAAGTAGTACAAGAGCACAATTGTAAAGGAAAGCCTTCTGGTAGTCTTATCAGGATGGTGCAGGATCAAGATATTATGGCATCGAAGAACAGTGTGGAAAGAGTACCATTCCAACCATTGAACACTGGAGGCAAAAGCAAATTAAGGACTTCTCGTCCTGTTTCTGCTACAAAGAGCACTGATGTCAGTGATCGTGAACAAATTTTAGACAAGCACATTAACTTTTCTGATATTAGTGGAGAGCAAAAGAAGAGCTGGGACATGGTTGTGGACACTGCTTCTCTTATGAACAAGGAATCAAGGAAAGCTTTGCAGCTTTTACAAGGTCTCAAGGGGACTCGATTAATCATTCCTAGATTGGTCATGGGGGAACTTAACCGTATGAAGCAACAATTCTCAATTTTCAAAAGAATTTCAGAGGCTTCTTTGGCCTTGGAATGGATCGAAGAATGTATGATAAATACAAACTGGTGGATTCATATCCGAAGTTCAATGGAGGAAGAAAGCATGATTGCTCCGACCCCACCCGCTTTTCCTCAGTCTCAATTTAGCTTGCAGAGCCTTTCATTCTACAAGAGTTCACTACAGGTTGCTTCGCCGACAGTAGAAGATCACATCCTAGACTTCACTCTTTTGTATAGAAGAAAGAAGTATGACAGACAACTTGTCCTGCTTAGTGAGGATGTCACTTTAAAAATCAAATGCATGGCCGAGGGTTTGCTATGTGAGAAGGTGCAGGAATTTCATGAGAGTTTAGTGAATCCATTTTCCGATAGGTTCCTATGGACTAATAGCTCTCCTCGAGGACAGACTTGGTCATGCCAGGACGACGTAGTTTTGAGGGAGAAATATTGTCATTTGCATAAGAACAAGTCATCAAAGGGTGCTGCAAGCGGTTTAAAGCTCATTCTCCTTCATAATTCTCAATATAAGCATTAG	3309	0.4007	MGSNASEEEEEGKIPVFTVLKNDAILKNIFILNKPTQPNDSSSVLKDQEDILIVGRHPDCDIMLTHPSVSRFHLHIRSKPSSQFLSLIDLSSVHGTWVSGRKLEPGVSVEMKEGDTLRIGASSRVYCLHWIPISHAYDLENPFVSELDVILEPQNEEELVQNLNCCPDEMEEIPSEDSILECVKMLFFENLEGSVEKETSAAPPMAEDIFYFCCPEERKSKPIDGTFEVQVEPCGTETSFSPTTSDWENKLYGSLNQELTVKKEIPSAPPVLEGIIHFCCEEEMKSQPKDEMLGVPSDPFGIENELCDSLNQVLPLLYVEPFAESEGIISFYCEEEMKSQSNLSKDEMLGVTNDTFGTEIDLCDSLNQVLPLPYVESFGESDSTLTLPIVEAVQGTKIQQFHTPPDTFTSPLPPDQEDLFEKCYSSFPINTDLASFGKESAAEAINVIPEESEFGCTVREDEQFRDIITTEGTFNSENIFLPVEEVVCDTICQQIKVVKEIVDSMSDGQKSKSELNAKHCSLDEIVHDIGNKCTGSICPIPLQIESVNLPPQEAVLGITIENHIPQSDMEFLESHGEPIEKKSSIGNIWLRRIKAASAPQIRTSKSTFKSMVEADTKVAVSNVKDTKKKTIPKDIFSVLDGQEEEEEIFTPDKENFSPNTLQLRFLKKKGKLQEFKHSKSKRSHNLKDTFSSDIYPNESISPNPIKENRKENKTIPKYLFSVLDEEEDIFTPDKENFTPDTLRLRLLKKKGERAETKCSKWSQNSKDNFSPNIYPDERISSTSNKENQTLKVVQEHNCKGKPSGSLIRMVQDQDIMASKNSVERVPFQPLNTGGKSKLRTSRPVSATKSTDVSDREQILDKHINFSDISGEQKKSWDMVVDTASLMNKESRKALQLLQGLKGTRLIIPRLVMGELNRMKQQFSIFKRISEASLALEWIEECMINTNWWIHIRSSMEEESMIAPTPPAFPQSQFSLQSLSFYKSSLQVASPTVEDHILDFTLLYRRKKYDRQLVLLSEDVTLKIKCMAEGLLCEKVQEFHESLVNPFSDRFLWTNSSPRGQTWSCQDDVVLREKYCHLHKNKSSKGAASGLKLILLHNSQYKH	1102

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal2g1032	1102	MobiDBLite	consensus disorder prediction	833	852	-	-
	Lal2g1032	1102	MobiDBLite	consensus disorder prediction	826	853	-	-
	Lal2g1032	1102	MobiDBLite	consensus disorder prediction	674	709	-	-
	Lal2g1032	1102	Pfam	PIN domain	878	1035	IPR002716	-
	Lal2g1032	1102	PANTHER	FHA DOMAIN-CONTAINING PROTEIN PS1	5	712	-	-
	Lal2g1032	1102	PANTHER	FHA DOMAIN-CONTAINING PROTEIN PS1	710	1100	-	-
	Lal2g1032	1102	ProSiteProfiles	Forkhead-associated (FHA) domain profile.	52	103	IPR000253	GO:0005515
	Lal2g1032	1102	MobiDBLite	consensus disorder prediction	758	780	-	-
	Lal2g1032	1102	MobiDBLite	consensus disorder prediction	761	780	-	-
	Lal2g1032	1102	PANTHER	TRANSMEMBRANE PROTEIN 18	5	712	-	-
	Lal2g1032	1102	PANTHER	TRANSMEMBRANE PROTEIN 18	710	1100	-	-
	Lal2g1032	1102	SUPERFAMILY	SMAD/FHA domain	44	132	IPR008984	GO:0005515
	Lal2g1032	1102	SMART	FHA_2	51	103	IPR000253	GO:0005515
	Lal2g1032	1102	MobiDBLite	consensus disorder prediction	689	703	-	-
	Lal2g1032	1102	Pfam	FHA domain	53	120	IPR000253	GO:0005515
	Lal2g1032	1102	Gene3D	-	873	1042	-	-
	Lal2g1032	1102	Gene3D	-	3	133	-	-
	Lal2g1032	1102	CDD	FHA	28	123	IPR000253	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal2g1032	Lal-Chr2	7083481	7088801	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal2g1032	-		-	lang:109352323	1818.51

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal2g1032	2	7083481	7088801	Lal2g1032	2	7083481	7088801	ECH
	Lal2g1032	2	7083481	7088801	Lal1g0900	1	6471208	6475856	LSH