Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0900 ATGGCTTCCAATGTATCAGAAGAAGAAGAGTGTAAAATCCCAGTGTTCACCGTAATGAAGAACAATGCAATCTTCAAAAACATCTTTATCCTCACCAAATCCCCACAACCCAATTCTTCTTGTGTTGTTAAAGATCACGAGAACATTGTCATTGTTGGTCGCCACCATGATTGTGACATCATGCTGACGCACCCCAGCATCAGCAGATTCCACCTCCAAATCCGATCCAAACCCTCTTCCCAATCCATCTCCATCCTCGACTTATCTTCCGTGCATGGAACATGGGTTTCGGAGAGGAAGGTGGAGCCAGGAGTGAGTGTGGAGATGAAGGAAGGTGATACCTTAAGGATTGGGGCTTCGAGTAGGGTTTATTGCCTGCGTTGGATTCCCGTTAGTCGCGCGTATGATTTGGATCACCCCTTTGTGTCAGAGCTGGATGTTGTTTTGGAAGATCAAAATGAAGAACAAGAACAAGTGCAGGGCCTGCAGAACTTTAAATATCGTCCAGATGAAATGGAAGAAATTCAATCAGATGATTCAATTCTTGAGTGTATAAAGTTGTTATTCTTTGATGAGAATTTGGAAGTAACTGTGGAAAAGGACATTGCAGCTGCACCTCCAATGCCAGAAGACATCTTTTCTTTTTGTTGTCCGGATGATAGGATGAGCCCATCCAAAGATGGAGCATTTGGATTCCTTAGTGAGCCTTGTAGAACCGGTACATCATATTTCCCTACAACCTCTGATTTGGAAAAAGAACTGTGTGACTCTCTAAATGATGAACTATCTGTGAAAATGGAGATTCCAATTCCAGAAGGGGCCATTTCTTTTTGTTGCGAGGAAGAAATGAGTCAATCCAAAGATGAAATGTTTGGAATCCCAAATGACCCTTTTGGGGCTATAAAGGGACTACGTGACTCTCTAAACCAGGTTCTAGCACTACCTTATGTGGAATCATCTGTTGAATGTTGTAGCACATTGACAGAATATCTCTCTGAGAGTGTATGTTTGCCGGTTGTGGAAGCTGTCCAGAGGACCAAAATGCAGCAATTACATACCACACAAGATACATTTACTTCATCATTACCACCACTTCCTGCAAAGTTTGATGGAAAATGTGCAGCTGAGGCTGTAATACCTAAAGAATCTAAATGTGGACATATGCTTAGAGATAATGAATGGGTTAGAGATAGAAGTGCTGCAGCAGAAATTTTTAATTCTGAGAACACATTTTTGCAAGTTGAGACTGTCTGCGACACCATATGTCAACAGAACAAAGTTGTTGAAGAAATTGCTATTGATTCATTACGTGATGGGAAAAAACAAGATACATGTGGTGAAGAGCACAAGTCAGAGTTGTCACACCTGAATGCCAAATACTGTTTACTGGATGAAAGTGTTAAAGATATAGGAAACAAGTGCACAGATAGCATTTGTCCCATATCAAATCATTCAGTGAATTTGTCAACGCCTCAGAAAGCTGTTTTGAAAATTACAAAAGCGGAATTCCTTGAAAGCGGCGGAGAACCAATAGAGCAAAAATCAACTATTGGCAATATTTGGTCAAGAAGAGGTAAAGCTGCAAGTGCTCCTCAGATTCGAACCAGCAAGAGTACATTTAAGAGCAAAGATATTGTTGACATTAAAGTTGCAATGAGTAATGCGAAGGATATCCCGAAGACAGTTTCAGAGGATTGTTTCTCTATTTTGGATGATGGGCAAGAAGAGGAAGAAATATTTACTCCAGATAAGGAAAACTTCAGCCCAAATACCCTTCAACTGAGGTTTCTGAAGAAGGGCAAGCTAGAAAAAACTAAACGTTCTAAGTCAAAAAGGTCACGCGATTCAAAGGATACTTTTAGTCCTAACTTCTATCCAAATGAAAGCATAATCTCCAACCCAAGCAAAGAGAATCAGACAGATATCATAAGTAAGACAGTCTCAGAAGATCTCTTCTCCCATTTCGATGGGGAAGAAGAAATCTTCACTCCAGATAAGGAAAACTTCAGTCCAAATACACATCAATTGCGGACTCTGAAAAAGAATGGTAAGCTAAAAGAAACTAAATTTTATGAGTGGTCACAAAATTCAAAGGAGAATTATAGTTCCAACATCTATCCAGATGAAAGAATAAGATCCACTTCAAACAAAGAGAACCAGACTCTAAAAGTAGTCCAAGAACAAAAGTCGAGAAAAAAGCCTTTTGGTAGTCATATCAAGGTGGCGCAGGAGCAAGGTGTTATGGCATCAAATAGAGTGGAAAGGGTACCCTTCCAAGTGTTAAATCCTTTTGGTAGTCCTATCAAGATGCCGCAGGAGCAAGGTGTTATGGCATCGAACAGAGTGGAAAGGGTACCCTTCCAAGTGTTAAATAACCCTAGAGGCAAGAGCAAATCAAAGACTTTTTGTCCTGTTTCTGCTACAAAGAGCAAATCAAGGACTTCTTGCCCTGTTTCTACTACAAAAAGCATTGGTATCAGTGATAGTGGACAAGTTTTAGACAGGCGCCTAAACTTTTCTCAGGATATTATTGGAGAGCAAAAGGAGAGCTGGGACATGGTTGTGGACGCTGCTTCTCTTATGAACAGGGAATCAAGGAAAGCTCTGCAGCTTTTACAAGGTCTCAAGGGGACTCGATTAATAATTCCTAGATTGGTTATAGGGGAACTGAACCGTATGAAGCAACAATTCTCAATTTTCAGAAGAATTTCAGAGGCTTCTTTGGCCCTGGAATGGATTGAAGAATGTATGGTAAAGACAAACTGGTGGATTCATATCCAGAGCTCAATGGAGGTAGAAAGTATGATTGCTCCGACCCCACCTGCTTTTCCTTACACTCAATTTAGCTTGCAGAGCCTTTCATTCCGTAGGAGCTCAGTAGAAGTCGCTTCACCAACTCTAGAAGATGACATCCTTGACTTTGTTCTTTTGTATAGAAGAAAACATAATGATGGACAACTTGTCCTGCTAAGTGAGGATGTCACTTTAAAAATCAAATGCATGGCAGAGGGTTTGCTATGTGAGTCAGTGCAGGTATTTCATGAGAGTTTAGTGAATCCATTTTCTGAGAGGTTCCGATGGGCCAACAGCTCTCCTCGAGGACAGACTTGGTCTTGCCGAGACGATGTAGTTTTGAAGGAGAAATATTGTCCTTTTCTGTCTAAGAAGTCATCAAAGGGAGCTGCAAGTGGTTTAAAGCTAATTCTCCTTCACAGTTCTCAATATAAACATTGA 3234 0.4069 MASNVSEEEECKIPVFTVMKNNAIFKNIFILTKSPQPNSSCVVKDHENIVIVGRHHDCDIMLTHPSISRFHLQIRSKPSSQSISILDLSSVHGTWVSERKVEPGVSVEMKEGDTLRIGASSRVYCLRWIPVSRAYDLDHPFVSELDVVLEDQNEEQEQVQGLQNFKYRPDEMEEIQSDDSILECIKLLFFDENLEVTVEKDIAAAPPMPEDIFSFCCPDDRMSPSKDGAFGFLSEPCRTGTSYFPTTSDLEKELCDSLNDELSVKMEIPIPEGAISFCCEEEMSQSKDEMFGIPNDPFGAIKGLRDSLNQVLALPYVESSVECCSTLTEYLSESVCLPVVEAVQRTKMQQLHTTQDTFTSSLPPLPAKFDGKCAAEAVIPKESKCGHMLRDNEWVRDRSAAAEIFNSENTFLQVETVCDTICQQNKVVEEIAIDSLRDGKKQDTCGEEHKSELSHLNAKYCLLDESVKDIGNKCTDSICPISNHSVNLSTPQKAVLKITKAEFLESGGEPIEQKSTIGNIWSRRGKAASAPQIRTSKSTFKSKDIVDIKVAMSNAKDIPKTVSEDCFSILDDGQEEEEIFTPDKENFSPNTLQLRFLKKGKLEKTKRSKSKRSRDSKDTFSPNFYPNESIISNPSKENQTDIISKTVSEDLFSHFDGEEEIFTPDKENFSPNTHQLRTLKKNGKLKETKFYEWSQNSKENYSSNIYPDERIRSTSNKENQTLKVVQEQKSRKKPFGSHIKVAQEQGVMASNRVERVPFQVLNPFGSPIKMPQEQGVMASNRVERVPFQVLNNPRGKSKSKTFCPVSATKSKSRTSCPVSTTKSIGISDSGQVLDRRLNFSQDIIGEQKESWDMVVDAASLMNRESRKALQLLQGLKGTRLIIPRLVIGELNRMKQQFSIFRRISEASLALEWIEECMVKTNWWIHIQSSMEVESMIAPTPPAFPYTQFSLQSLSFRRSSVEVASPTLEDDILDFVLLYRRKHNDGQLVLLSEDVTLKIKCMAEGLLCESVQVFHESLVNPFSERFRWANSSPRGQTWSCRDDVVLKEKYCPFLSKKSSKGAASGLKLILLHSSQYKH 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0900 1077 Gene3D - 2 131 - -
Lal1g0900 1077 MobiDBLite consensus disorder prediction 798 820 - -
Lal1g0900 1077 Pfam FHA domain 50 118 IPR000253 GO:0005515
Lal1g0900 1077 CDD FHA 30 121 IPR000253 GO:0005515
Lal1g0900 1077 SUPERFAMILY SMAD/FHA domain 36 130 IPR008984 GO:0005515
Lal1g0900 1077 Gene3D - 849 1017 - -
Lal1g0900 1077 MobiDBLite consensus disorder prediction 602 638 - -
Lal1g0900 1077 SMART FHA_2 49 101 IPR000253 GO:0005515
Lal1g0900 1077 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 771 1075 - -
Lal1g0900 1077 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 649 761 - -
Lal1g0900 1077 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 4 643 - -
Lal1g0900 1077 Pfam PIN domain 854 1010 IPR002716 -
Lal1g0900 1077 ProSiteProfiles Forkhead-associated (FHA) domain profile. 50 101 IPR000253 GO:0005515
Lal1g0900 1077 MobiDBLite consensus disorder prediction 619 638 - -
Lal1g0900 1077 PANTHER TRANSMEMBRANE PROTEIN 18 4 643 - -
Lal1g0900 1077 PANTHER TRANSMEMBRANE PROTEIN 18 771 1075 - -
Lal1g0900 1077 PANTHER TRANSMEMBRANE PROTEIN 18 649 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0900 Lal-Chr1 6471208 6475856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0900 - - lang:109325510 1786.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0900 1 6471208 6475856 Lal1g0900 1 6471208 6475856 ECH
Lal2g1032 2 7083481 7088801 Lal1g0900 1 6471208 6475856 LSH