Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1025 TTTCATTCATATAGATCCTTCGTTCTTCACAATTCTGAATCCTTGCTTGTTAAGAAAGAATCAAATTTGGGTTTCATTTCTGATCTCACCATGTCGATGCTCGACTCTTTCTTCAACAAAGGTTTTAAGGCTGCCAAATGTAAAACCCTGCTGAAACTGTCAATCCCACGTATAAAGTTGCTAAGAAACAGAAGAGAGATTCAGTTGAGGAATATGAGGCGCGATATTGCCAAGCTGCTTGAGACTGGTCAAGAAGCCACAGCTCGCATTAGGGTGGAACATATTATCAGAGAGGAGAACATGTTGGCTGCTCAAGAGATCATTGAACTATTTTGTGAACTTATTGCTGTTCGTCTTCCAATAATCGAATCACAAAGGGAATGCCCCCTAGACTTGAAGGAAGCCATATCCAGTGTATGCTTTGCTGCACCAAGGTGTGCTGATCTGCCAGAATTGTTGCAGGTTCAGTTTCTATTTGGTGCCAAATATGGTAAAGAGTTTTTATCTGCTGCAACTGAGCTCAGGCCAGACTGCGGTGTTAATCGTCAGTTAATAGAGTTGCTGTCAGTTCGTGCTCCTTCACCAGAAAAGAAACTGAAACTTCTAAAAGAAATTGCTGTTGAGCATGACTTAGATTGGGATCCAGCACCTTCAGAAACCGAGTTCTTTAAAAAACATGAAGACTTACTGGATGGCCCCACAAAAATGGTTAGTGGGTCAACATTGCCCCTTCATGAAGAAAAACACAATGAAGAGTTGCCTTCCATTCATGACTCACCCACTAAAGAGCAACCTGGTTCTGACTCTGACTCCGACATGTTTGAATTTCCTGAAGTTCCTAAAGTATCAGTCCGGCCAGGTCCAAGTGCTGCCACAGCTCCAGATACAGTTGCTCCTCTGGTTATGCTGCCCCTTGAAGTTGATCTTGATTCACCAAGCCATTCTGCTCATTTTGAAGATGTGAACCAGGGGCAAACTGAAGGAAGATCATCGGTTCCCAAAGATGAATCTCATACTTCGTTTGATAAAATGGAAAGTAAACAGTTTGTGCCATTCATCTCTCCTCCACCACTATCACCTAGATCACATTCTGCTAGACATAGTGATCCACCTGTAATCTTGTCTGCAAAATATAGTGACTCACCTGCCTCCTTGTCTGCAAGGTATAGTGACCCACCTGCCTCCTTGTCTGCAAGGTACAGTGACACACCTGCCTCCTTGTCGAGCACAAAATCTGAGCCTGAAATTGATTTGAAGGATGTGCTGGCTGCTGCAAATGCTGCTGCAGAAAGTGCTGAACGTGCAGCAGCTGCAGCCCGCTCAGCGGCTAGCCTTGCTCAAGTCCGTATTAATGAGCTTACCAAGAAAAAAAGCGAACATGTACTAGACAGCAGCTCTGAGAACCCATTTTATGCAAGTGGTAGTAATGAATCTACAATAGCAGAAGAGGGACATTTCAATTTCAATGAGCCACATATTGCTGGGAACTCTGATGGAAGTGAAAGAAATGATCTTGAACCTCACCAGGACCATTATTATACTTCATCAAGCTTTCCTTCGTTTGACACACTCAAGGAAGATTTATATTCTTCCCTACCGTCGGATCATGCAGTGGACAACAAATCCTCTACTCACCAGCCTCAGAGATTACCTTCAATGGACGATGACCCATATTTCTCATACCCAAATTTATTTACGTCACAAAGCTCGAATATTGGATCGCATACTCATTCAGATAATGATCGTTCGACTCGTGATCTGTGA 1764 0.4325 FHSYRSFVLHNSESLLVKKESNLGFISDLTMSMLDSFFNKGFKAAKCKTLLKLSIPRIKLLRNRREIQLRNMRRDIAKLLETGQEATARIRVEHIIREENMLAAQEIIELFCELIAVRLPIIESQRECPLDLKEAISSVCFAAPRCADLPELLQVQFLFGAKYGKEFLSAATELRPDCGVNRQLIELLSVRAPSPEKKLKLLKEIAVEHDLDWDPAPSETEFFKKHEDLLDGPTKMVSGSTLPLHEEKHNEELPSIHDSPTKEQPGSDSDSDMFEFPEVPKVSVRPGPSAATAPDTVAPLVMLPLEVDLDSPSHSAHFEDVNQGQTEGRSSVPKDESHTSFDKMESKQFVPFISPPPLSPRSHSARHSDPPVILSAKYSDSPASLSARYSDPPASLSARYSDTPASLSSTKSEPEIDLKDVLAAANAAAESAERAAAAARSAASLAQVRINELTKKKSEHVLDSSSENPFYASGSNESTIAEEGHFNFNEPHIAGNSDGSERNDLEPHQDHYYTSSSFPSFDTLKEDLYSSLPSDHAVDNKSSTHQPQRLPSMDDDPYFSYPNLFTSQSSNIGSHTHSDNDRSTRDL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1025 587 MobiDBLite consensus disorder prediction 454 519 - -
Lal2g1025 587 Gene3D - 35 221 IPR042277 -
Lal2g1025 587 Coils Coil 422 442 - -
Lal2g1025 587 MobiDBLite consensus disorder prediction 311 416 - -
Lal2g1025 587 MobiDBLite consensus disorder prediction 249 274 - -
Lal2g1025 587 MobiDBLite consensus disorder prediction 249 269 - -
Lal2g1025 587 MobiDBLite consensus disorder prediction 532 587 - -
Lal2g1025 587 MobiDBLite consensus disorder prediction 535 550 - -
Lal2g1025 587 MobiDBLite consensus disorder prediction 316 330 - -
Lal2g1025 587 MobiDBLite consensus disorder prediction 561 577 - -
Lal2g1025 587 Coils Coil 62 89 - -
Lal2g1025 587 MobiDBLite consensus disorder prediction 464 483 - -
Lal2g1025 587 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 31 575 - -
Lal2g1025 587 Pfam Regulator of Vps4 activity in the MVB pathway 48 211 IPR005061 GO:0015031
Lal2g1025 587 PANTHER IST1 FAMILY MEMBER 31 575 IPR005061 GO:0015031
Lal2g1025 587 MobiDBLite consensus disorder prediction 379 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1025 Lal-Chr2 7004653 7010174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1025 - - gmx:100805899 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1025 2 7004653 7010174 Lal2g1025 2 7004653 7010174 ECH
Lal2g1025 2 7004653 7010174 Lal1g0892 1 6373390 6378689 LSH