Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0946 ATGAAGAAAGTAGTGTTGAAGGTGGACTTATATGATGACAGAATCAAGCAAAAGGCTATGAAGACAGTTTCTGGCATCTCAGGGGTTGAGTCAGTGTCTGTGGATATGAAAGACAAGAAATTGACCTTAATAGGAGACATTGATGCAGTACATGTAGTAGGAAAGCTAAGGAAATGGTGTCATACTGATATATTATCTGTTGGACCTGCAAAAGAGGAAAAGAAAGAAGAATCTAATAAGTCAGATGGTAAGAAAGATTCAACAAAAGTGACAGAACATGTCAAGCTTTATGAAGCATATCCTCTTAATTATTATACTAGACCATTACTTTATAATAATCAGTATCACTATGTTACAAATGTGGAAGAGGATCCTAATGGCTGTGTCATCTGCTAA 396 0.3561 MKKVVLKVDLYDDRIKQKAMKTVSGISGVESVSVDMKDKKLTLIGDIDAVHVVGKLRKWCHTDILSVGPAKEEKKEESNKSDGKKDSTKVTEHVKLYEAYPLNYYTRPLLYNNQYHYVTNVEEDPNGCVIC 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0946 131 Pfam Heavy-metal-associated domain 6 57 IPR006121 GO:0046872
Lal2g0946 131 SUPERFAMILY HMA, heavy metal-associated domain 1 60 IPR036163 GO:0046872
Lal2g0946 131 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 131 - -
Lal2g0946 131 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 131 - -
Lal2g0946 131 Gene3D - 1 73 - -
Lal2g0946 131 MobiDBLite consensus disorder prediction 69 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0946 Lal-Chr2 6349230 6350790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0946 - - gmx:100801079 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0946 2 6349230 6350790 Lal2g0946 2 6349230 6350790 ECH
Lal2g0946 2 6349230 6350790 Lal13g0057 13 360632 361808 PCT
Lal13g0057 13 360632 361808 Lal2g0946 2 6349230 6350790 PCT