Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0057 ATGAATAAAGTAGTGCTAAAGGTGGAAATATATGATGATAAAATTAAGAAAAAGGCCATGAAGGCAGTTTCTAGTCTTTCAGGAGTTGAGTCAGTGAGTGTGGACACGAAGAACCAGAAATTGACCTTAACCGGAGACATTGACCCTGTGGTTATTGTAGGCAAACTGAGGAAGCTATGTCTTACTGAGATACTCTCTGTTGGACCAGCCCAAGAGGAGGAGAAGAATAAGAAGAAGAAGAAGAAGGAGGAGACTAAGAAAGATGAGAAAAAGAATACAGAAGTCAAGAAAAATGATCAACAAGAGAGTTTGGCTCATATTGTGAAGGCCTATGAAGCCTATCATTATAATCAGATGAGACAACCACATTACTATTACACAAGTGTGGAAGAGAATCCTAATGCATGTTCCATCTGCTAA 420 0.3881 MNKVVLKVEIYDDKIKKKAMKAVSSLSGVESVSVDTKNQKLTLTGDIDPVVIVGKLRKLCLTEILSVGPAQEEEKNKKKKKKEETKKDEKKNTEVKKNDQQESLAHIVKAYEAYHYNQMRQPHYYYTSVEENPNACSIC 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0057 139 Coils Coil 70 92 - -
Lal13g0057 139 MobiDBLite consensus disorder prediction 70 101 - -
Lal13g0057 139 Pfam Heavy-metal-associated domain 7 58 IPR006121 GO:0046872
Lal13g0057 139 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 139 - -
Lal13g0057 139 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 139 - -
Lal13g0057 139 SUPERFAMILY HMA, heavy metal-associated domain 4 60 IPR036163 GO:0046872
Lal13g0057 139 Gene3D - 1 73 - -
Lal13g0057 139 CDD HMA 21 59 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0057 Lal-Chr13 360632 361808 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0057 - - gmx:100793345 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0057 13 360632 361808 Lal13g0057 13 360632 361808 ECH
Lal2g0946 2 6349230 6350790 Lal13g0057 13 360632 361808 PCT
Lal13g0057 13 360632 361808 Lal2g0946 2 6349230 6350790 PCT