Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0895 ATGTATCAATGCAATTATAAAGACCAAGAGAACCCAAACAACATGCTAACCAAGCCATTGATCTCAAAACAAAAACAAGAACAAAATAAAACCCATCTTTCTGATGCCTTTAAGGAAGTGATATCTATAAACAAAATAGCACTCCCTATGATACTAACTGGTATCCTTCTCTATTGCCGTTCAATGATCTCAATGCTTTTCCTTGGAAACCTTGGAGAACTAGCCTTAGCAGGTGGATCATTAGCACTTGGCTTTGCAAATATCACTGGATACTCAATCCTATCTGGTCTAGCAGTTGGAATGGAACCCATTTGTGGACAAGCTTTTGGTGCAAAAAGGTTTAATCTTTTAGGCCTATGCTTGCAAAGAACCATTCTCTTGCTTCTCTTGACAACTATTCCTATAACTATTCTTTGGTTTTACATGAAGCAAATTCTTCTATTTTGTGGCCAGGATGAAGCTATAGCCACACAAGCACAATTATATCTTTTTTATTCCATTCCTGATCTCATAGCACAATCTCTTTTACACCCTTTAAGGATTTACCTTAGAAGCCAATCCATTACTCTGCCTCTCACCCTTTGTGCCACCTTTTCAATTCTCCTTCACATACCCATCAACTATTTTCTTGTCTCTTATCTCAAACTTGGACTCAAGGGTGTTGCTCTTAGTGGGGTTTGGACAAATTTCAACCTTGTAGCTTCTTTGATTCTATATATAATCTTTTCTGGCACTCATAAGAAAACATGGGGTGGTTTTTCTTATGGGTGTTTCACACAATGGAAGTCTCTTCTCAATTTGGCCATCCCAAGCTGCATTTCTGTGTGCCTTGAATGGTGGTGGTATGAGATCATGATTTTGTTGTGTGGGTATTTGATAAACCCGACCGCAACGGTTGCCTCAATGGGCATTTTGATTCAAACCACTTCTTTGCTTTACATTTTCCCATCATCACTAAGCTTTAGTGTTTCCACAAGGGTTGGTAACAAACTAGGTGCACAAAAGCCTTCAAAGGCAAGGCTTTCTGCAATTGTAGGCCTCTCCTGCAGCTTCATTTCAGGTCTCTCAGCCCTTGTTTTTGCCGTTATGGTTAGGAACATTTGGGCTACCATGTTCACAAGGGATAAAGAGATTATAAGATTAACATCTTTGGTGTTACCTATAATAGGTCTTTGTGAGCTTGGAAATTGTCCACAAACAACAGGTTGTGGGGTTCTAAGAGGCACAGCAAGGCCTAAAGTTGGTGCTAATATCAACTTGGGTTGCTTTTATCTTGTGGGAATGTCTGTGTCAGTTTGGCTAGCTTTCTTTGTTGGTTATGATTTTCAAGGTTTATGGCTTGGTCTACTTGCTGCTCAGGGTTCATGTGCTGTTACCATGCTGGTAGTTCTGAATCAAACAGATTGGGAAGTGGAGGCTCAAAGAGCAAAGAAACTAACAGGAATTGGTGGTGGTGGTGGTGGTGATGAGAATCAAGAAGAATTTGTTGATGATGAGAAGAATGCAACTAAACTTGAAAGCAAGGAATATTCTTTTCCTTTATTAACTAATTCACATGAAGATAAACAGTGTTTGGTTTAA 1581 0.3934 MYQCNYKDQENPNNMLTKPLISKQKQEQNKTHLSDAFKEVISINKIALPMILTGILLYCRSMISMLFLGNLGELALAGGSLALGFANITGYSILSGLAVGMEPICGQAFGAKRFNLLGLCLQRTILLLLLTTIPITILWFYMKQILLFCGQDEAIATQAQLYLFYSIPDLIAQSLLHPLRIYLRSQSITLPLTLCATFSILLHIPINYFLVSYLKLGLKGVALSGVWTNFNLVASLILYIIFSGTHKKTWGGFSYGCFTQWKSLLNLAIPSCISVCLEWWWYEIMILLCGYLINPTATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGAQKPSKARLSAIVGLSCSFISGLSALVFAVMVRNIWATMFTRDKEIIRLTSLVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMSVSVWLAFFVGYDFQGLWLGLLAAQGSCAVTMLVVLNQTDWEVEAQRAKKLTGIGGGGGGDENQEEFVDDEKNATKLESKEYSFPLLTNSHEDKQCLV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0895 526 Pfam MatE 49 209 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal2g0895 526 Pfam MatE 270 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal2g0895 526 PANTHER PROTEIN DETOXIFICATION 26 493 - -
Lal2g0895 526 CDD MATE_eukaryotic 39 475 IPR045069 GO:0042910|GO:1990961
Lal2g0895 526 TIGRFAM matE: MATE efflux family protein 49 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal2g0895 526 PANTHER MULTIDRUG RESISTANCE PROTEIN 26 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0895 Lal-Chr2 5911825 5913405 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0895 K03327 - gmx:100788027 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0805 1 5501540 5503087 Lal2g0895 2 5911825 5913405 ECH
Lal2g0895 2 5911825 5913405 Lal2g0895 2 5911825 5913405 ECH
Lal2g0895 2 5911825 5913405 Lal1g0805 1 5501540 5503087 LSH