Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0614 ATGAGAAGCATTTCAAAGACAACATGGTTCATTTTCATTCTTATTATAGTACTAATAGCAGTTCAAGTTGAAAGCCGTGTCTTTGGCATAAGTAGTTCTGAATTGGTTAATGATGGAGCTGATGGTGATGATGTTAAAAATGAAAGTTCTTACCTTTACCTCAAAGGGAGTGAGCCATCTGAAAAGTACTGTGAGCAAATGTATGGTTTCTTGCCATGTTCAACTAACATTTTGGGTCATCTCTTTCTGATTTTGGTGTATGAGTACTTGTTATTCCATGGAGAATCATACTTGGCTGCTGGTGGTGAACAAGTCTTCAAGATTCTTGGCCCTGGCATTTTTGGTTCTAGTGCCTTTGATATCCTTGGTGCCCTTCCCGAGTCTCTAATTCTTCTTGTTACTGGACTTAAGAGTGATAAAGAAAGTGCACAAGAGTATGCATCCAATGGAGTTGGCTTGTTGGCTGGATCTTCCATCTTGCTTTTGACAGTAGTTTGGGGAACCTGTGTTATCATTGGTAGTCAAAAGTTGAAAGATGACCCTAAATCTAGAGGGTCTAACACCTCCAATTCATCAAATGGAAGGATAAAAGAATCACTAACTGGTTCTGGCATTATTGTGGATATAGAGACTATAAAGATGTCAAGAATGATGGTTTTCTCAGTTATACCACTCATCATAATGCAGATTCCAACTTTGTTCAAGCTATCTCCCACACCTAGTGCTGTGACCTTGATGGTTTCTCTTATCATCGCTGTCGTTTTTCTCATCTCCTACTTCATATATCAGGTTTTCAAACCTCACATAGAGAAGACAAGACTAGAATATATTAAACATGACCAATTAATATTAAGGATATTTCAGCATGTTGAAAAGCAAACTCTTCAAAAGATCCTCACTGAGGATGGAACCCCTAATGTTACAGCCATAAGTGGACTATATCATGAAATAAGCAGACATGGGGATAAGGACTTGTTAGCTTCTGAAATTAAAGAGCTGCTGCTTCAGAACACAGGAAATGGAGTAAACATCAAAGAGGAACAAATAGCAGGCATGTTAAGAATTTTTGACCGGAATGGCGACCAAGTTATAACCAAGGAAGAATTTGTGGTAGGCTTGACAGAATATATTAACCAAACAAAGCATGCTCTGGACAGGAAGTACCTCCCAAAAGATTCAATGAACAACTTATATCAGGTTTTTATCAAGCCATGGATTGAACATACGAGGAGAGAACGTGAATTGAAGGGACATCTTATATCTGAAGTGTTAAGGCATGCTCAGAATGATATGGTTGGAAGTCTTTGTAAAGATGATGGTACACCTGATGAAGCTACAATAAGAAGGTTATTTGAGCAAGTTGATAGCAATGGAGATAATCACGTCTCAAAATCAGAGTTAAAAAAATTAGTCAAGGACATTCATCTCGGTAAGGTTGCAGATTCAGAGGAGGCAGTTACAAAAATCGTTCACGAACTTGACCTTAACAGAGATGATGAAATCAGTGAGGATGAATTTGTTGTTGGATTTTCAAAATGGATAAACAGAAATTCCAGTCAAGCACCTCACTTAATTACAACGACTCATGAAAATCATCAAACCTGGGAAGAAGTTGAAGAAGTGATGGAAGATAACCAAATCAAAGGAATAAAAGCTTGGTTGAGCGCTTTGGGATATGTAATGCTGGGAATTACTATGTTATCTCTTCTTGCAGAGCCCTTAATACACAGTGTCCAAAACTTCTCTGAAGAAGCAGGAATTTCATCTTTTTTCATCTCATTTATTATAGTCCCCATTGCTACAAATTTTAGAGAAGCAACCTCAGCTATCAAAGAAGCTAGTCATAAGAAGAGAAGAAACACTTCTCAAACAATTTATGAGATTTATGGATCAGTTTTCATGAACAATATTCTTGGCTTTGTGGTGATCTCCAGTCTAATATATATGAGAGATATCACTTGGAAATTCTCAGCTGATGCATTGGTTGTAGCAATTGTATGTGCTGCGGTGGGCCTCACTGCAAGTTTTCGCTCCACTTTCCATCTCTGGACATCTGTTCCTGCATATGCCTTGTACCTAGCATCATTAGTTTTGGTTTATATTCTTAAAGATATTCTGCATTATGTTTAG 2130 0.377 MRSISKTTWFIFILIIVLIAVQVESRVFGISSSELVNDGADGDDVKNESSYLYLKGSEPSEKYCEQMYGFLPCSTNILGHLFLILVYEYLLFHGESYLAAGGEQVFKILGPGIFGSSAFDILGALPESLILLVTGLKSDKESAQEYASNGVGLLAGSSILLLTVVWGTCVIIGSQKLKDDPKSRGSNTSNSSNGRIKESLTGSGIIVDIETIKMSRMMVFSVIPLIIMQIPTLFKLSPTPSAVTLMVSLIIAVVFLISYFIYQVFKPHIEKTRLEYIKHDQLILRIFQHVEKQTLQKILTEDGTPNVTAISGLYHEISRHGDKDLLASEIKELLLQNTGNGVNIKEEQIAGMLRIFDRNGDQVITKEEFVVGLTEYINQTKHALDRKYLPKDSMNNLYQVFIKPWIEHTRRERELKGHLISEVLRHAQNDMVGSLCKDDGTPDEATIRRLFEQVDSNGDNHVSKSELKKLVKDIHLGKVADSEEAVTKIVHELDLNRDDEISEDEFVVGFSKWINRNSSQAPHLITTTHENHQTWEEVEEVMEDNQIKGIKAWLSALGYVMLGITMLSLLAEPLIHSVQNFSEEAGISSFFISFIIVPIATNFREATSAIKEASHKKRRNTSQTIYEIYGSVFMNNILGFVVISSLIYMRDITWKFSADALVVAIVCAAVGLTASFRSTFHLWTSVPAYALYLASLVLVYILKDILHYV 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0614 709 ProSitePatterns EF-hand calcium-binding domain. 494 506 IPR018247 -
Lal2g0614 709 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Lal2g0614 709 Pfam EF-hand domain pair 344 375 IPR002048 GO:0005509
Lal2g0614 709 SUPERFAMILY EF-hand 317 510 IPR011992 -
Lal2g0614 709 MobiDBLite consensus disorder prediction 177 196 - -
Lal2g0614 709 Gene3D - 380 530 - -
Lal2g0614 709 ProSiteProfiles EF-hand calcium-binding domain profile. 481 516 IPR002048 GO:0005509
Lal2g0614 709 Gene3D - 544 704 IPR044880 -
Lal2g0614 709 ProSiteProfiles EF-hand calcium-binding domain profile. 344 379 IPR002048 GO:0005509
Lal2g0614 709 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 11 390 - -
Lal2g0614 709 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 554 707 - -
Lal2g0614 709 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 397 523 - -
Lal2g0614 709 ProSitePatterns EF-hand calcium-binding domain. 357 369 IPR018247 -
Lal2g0614 709 Gene3D - 304 379 - -
Lal2g0614 709 CDD EFh 447 511 IPR002048 GO:0005509
Lal2g0614 709 Pfam EF-hand domain pair 446 508 IPR002048 GO:0005509
Lal2g0614 709 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 397 523 - -
Lal2g0614 709 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 554 707 - -
Lal2g0614 709 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 11 390 - -
Lal2g0614 709 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Lal2g0614 709 SMART efh_1 348 376 IPR002048 GO:0005509
Lal2g0614 709 SMART efh_1 446 474 IPR002048 GO:0005509
Lal2g0614 709 SMART efh_1 485 513 IPR002048 GO:0005509
Lal2g0614 709 Pfam Sodium/calcium exchanger protein 108 265 IPR004837 GO:0016021|GO:0055085
Lal2g0614 709 Pfam Sodium/calcium exchanger protein 557 700 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0614 Lal-Chr2 3650432 3655774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0614 397 702 EF-hand Containing Proteins AT1G53210 39.697 2.38e-63 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0614 - - gmx:100799062 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0614 2 3650432 3655774 Lal20g0361 20 2899386 2902944 ECH
Lal2g0614 2 3650432 3655774 Lal2g0614 2 3650432 3655774 ECH