Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0433 ATGGAAACAAGATCTTCAAAACGCAAAAGAATTGCTCAAATATTAGAGAATGAAGCTAATGCAGCCATTGATCGAATCAGCGATCTTCCTGATGATGTTCTTCATCAAATTCTTTTTCTCATTCCGATCAAATGTGTGGCACAAATGAGTGTTCTTTCAAAAAGATGGAAATTTCTTTGGTCCGCTTTCCCAGACCTTGACTTCACAACCCTCTACCCATTTGATATTTCTTCAAAAAATCTTAAATTTTCAAACTATGAGAAACAAAGGAATCATCCTTTGGATTCAACACCAATGGATTTCATCACCCAAGTTCTTTCTGCTCGTGACAAGGACTCAGACATTAGGGTTCTTTGTTTTCGTGGCGGTTTAGGTTTTTCGCGGCTAAATAGTTTATTTCGTAGTGCCATTAAGCATAATGTTAGAGAACTTGACATTGAAGTCACCACTTCAGTGACCAAAGATGATTATTTCAACTTTCCAAGATGTGTTATAGGGAGTGAATCTTTAAGGGTCTTGAAATTAAAATCGGGTTTTCGTTTGCCTCCATCATCTATTATGAGGAATGGGTTCCAATCTCTACGCACATTGTCTCTTTCACTAGTAATTTTGTATAATCAGCCTTATCTATCTGATTTGTTCACTGAATCATCATTTCCTCTTTTGAAAAATTTGCATCTAGATATGTGCTTTGGATTGAAATATCTCCATGTTGGTTGCCGGGGTCTTGAAGATTTGAGCTTAGAGAAATGTTTTCAGCTGCATGGTTTGGATATCTCATGTGCAAAACTAGAAAAAATGAGAGTAACAAGTTCTTTTGATGCTTATAGTAAAAAGAGTTGGGTAAGAATCAATGCACCAAAGCTTCAACATTTGTTTTGGCAACATAATGCTGTCAGTGACACCACTGTTTTTGAGCAATCAAATTTCTTATGTGAGGCATACGTTGGTTTCTTTACAATGAAAGGAGTTATTGGTATGGATAAGGTTCGAAGTGTCAATAATTTCTTATCCGCACTATCTCATGCTGGTTCCATGGTTCTTGAAAGCCAAACTATTGAGATTCTATCAAACAATAACTTCTTTATTCCTCCATTTAGAAATCTTAAATCATTAGAGCTGAATATTGGTTTCAGCAAAAGTAATGTCCGGGGACTAGCATGCCTGTTCAGGAGTTCTCTTATGCTCCACACCCTGATTATGAAGATGATTAAAGATTATAAGATTGAAGGAAAACAATGGAATAGTGAGTTAAGGGACATGACTAGCACTGAGGAAGAGAAGTATTGGGAATCTCAGATCCCAAGTCTGATGTCATTCCTGCAACACTTGAAAGTGGTGAAAATCCATAGATTTTTTGAATGTGAGAGTGAAGTTACACTTGCAAAGTTTCTCCTCAAGCATGGGAATGCGTTAGAAGAAATGATATTATGTGCAGGACGATGCAATGCTGGAGAAACACTAAGAAGACAAAAAATAAGGTCACAAATGATGGGGTTTTCTCGGGCTTCTTCCAATGCAAAACTAGTTTTTCATTAG 1539 0.3671 METRSSKRKRIAQILENEANAAIDRISDLPDDVLHQILFLIPIKCVAQMSVLSKRWKFLWSAFPDLDFTTLYPFDISSKNLKFSNYEKQRNHPLDSTPMDFITQVLSARDKDSDIRVLCFRGGLGFSRLNSLFRSAIKHNVRELDIEVTTSVTKDDYFNFPRCVIGSESLRVLKLKSGFRLPPSSIMRNGFQSLRTLSLSLVILYNQPYLSDLFTESSFPLLKNLHLDMCFGLKYLHVGCRGLEDLSLEKCFQLHGLDISCAKLEKMRVTSSFDAYSKKSWVRINAPKLQHLFWQHNAVSDTTVFEQSNFLCEAYVGFFTMKGVIGMDKVRSVNNFLSALSHAGSMVLESQTIEILSNNNFFIPPFRNLKSLELNIGFSKSNVRGLACLFRSSLMLHTLIMKMIKDYKIEGKQWNSELRDMTSTEEEKYWESQIPSLMSFLQHLKVVKIHRFFECESEVTLAKFLLKHGNALEEMILCAGRCNAGETLRRQKIRSQMMGFSRASSNAKLVFH 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0433 512 Pfam F-box domain 26 60 IPR001810 GO:0005515
Lal2g0433 512 ProSiteProfiles F-box domain profile. 23 71 IPR001810 GO:0005515
Lal2g0433 512 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 20 457 - -
Lal2g0433 512 SUPERFAMILY RNI-like 138 401 - -
Lal2g0433 512 SMART 9598neu4hmm 438 512 IPR006566 -
Lal2g0433 512 SUPERFAMILY F-box domain 19 75 IPR036047 GO:0005515
Lal2g0433 512 Gene3D Ribonuclease Inhibitor 19 312 IPR032675 -
Lal2g0433 512 Pfam FBD 440 477 IPR006566 -
Lal2g0433 512 PANTHER F-BOX PROTEIN-LIKE 20 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0433 Lal-Chr2 2589643 2591668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0433 24 458 EF-hand Containing Proteins AT5G41840 24.380 6.68e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0433 - - ahf:114927451 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0433 2 2589643 2591668 Lal9g0400 9 2657742 2659861 LSH