Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0430 AATGTGAGGATGAGGCTTTATGCTGTGGTGCCATATGCCATGATATTAATATTATGCTATGCTCAAACAAACTATATAATTATGGAACCTTACTGCAATCTTGAAGTGGATGTAAATGGAGAAGAGACCTTCATGGTGGACAAGACAATTATTGCTCAGTACTCAGGAAAGTTTGCTAAATTATTTGGAAAATCAAGCGAAGCCAGGGGGAAACTGAAAGTAATATTCAATGATTTTCCAGGAGGTGCAGAAGGTTTTGAGCTTATGTTAAGATTTTGTTATAACAATGGAACAACTAATATAACTCCCTCCAATTTGTTACTCACACATTGTGCTGCTGAATTCATGGAAATGAAGGAATCTGTGGCTGGTGTTTTTAACTTATTGGAACAAACAGAAAAAACACTTCAAGAGATGAACTTTTGGACATGGTCAGGCCTTTTGATTGCATTGAAGCAGTGTCAGAATTTATCATCACCTACAGATTCATTGGTTCTAGAGAAATGCTTGGATACCTTAGTAGGGAGGCTAGTTTTGGCAAGTGAAGCAAGTCCTTGTCCATCAACTTGTTCTACTGATAGTTCTGGAATTCGGTTTTCGTGTGACTCTAAAAGCACTGAGAGTATAAAGACAAATTCTTCTCGTACACCTTGGTGGTTTGAGGATCTCCTATTTTTGAGTCCCTTGTTGGTTGAAATGTTGGTAAAGTCAATGCTTTCGCGTAAGTTAGACCATGTTGTCATAAGCAAGTTTTTGCTGTACTATCAGAAGGCAAAGTTTTCCACTGTTACTACTGATGAAAAGTGCAAGATCATAGAAATGATCCTAGATATGCATTATAATTTGGATCATGGTTCTATTTCTTGCAAGAATTTATTTGGGATTCTTCGGGTTACGTTGAGTTTGAACATAAGCAAATGTAGCAGGAACAAGTTGGAGAATATGATTGGTTCTCATTTGGATCAAGCAACATTGGACAATTTGCTTGTTCCATCTCCGTATGGAATACGCTATTTATATGATGTGAACCTTGTTCTGAGAATTCTGAAAGCATTCCTGCATGGAAGAACTGGCCTAGTCACTCCCATTCGGATGAGGAAAGTTGCTGGCTTAATAGATTTGTATATAGCAGAAATAGCACCTGATCCTTCCTTAAAAACTTCCAAGTTCTTGGCTCTTGCCACAGCACTTCCAGATTCTGCTAGAGATTCTTATGATGAGCTCTACCATGCAGTAGATATGTATCTAGAGGTACATGCTCAATTGTCACAAGAAGATAGGATGAAGTTGTGCTGTGGTTTAAATTATGAGAAGCTTTCACCTCAAGCTTGTGTACACCTTTCTCAGAACACAAAATTTCCTCCAAAATCTGCAGTTCAGGCTCTCATCTCTCAGTCGTCTAAGCTCAACAACGTACTCCGTCCTACACCTAGTACAACACCATACAACAATTGGCCATGCAGTTCAGGAAAGGGAGATAAAACCAGTGAACAGGATGTGTTGTATGATGATGGAAACTTTGATATTTCAGATGATAATGAGAAACTCAGAACACATTTGCAAGGAATGCAGTGCAGGGTCATGGAACTAGAGAAAATCTGTAAGAAAATGCAATCTCAGATGAGAAAAATCACAAAATCAAACGTATCAGGCCAGAGTAATAATGCAAGATCCTTGCCCAAACTCTGTTCATGA 1695 0.3847 NVRMRLYAVVPYAMILILCYAQTNYIIMEPYCNLEVDVNGEETFMVDKTIIAQYSGKFAKLFGKSSEARGKLKVIFNDFPGGAEGFELMLRFCYNNGTTNITPSNLLLTHCAAEFMEMKESVAGVFNLLEQTEKTLQEMNFWTWSGLLIALKQCQNLSSPTDSLVLEKCLDTLVGRLVLASEASPCPSTCSTDSSGIRFSCDSKSTESIKTNSSRTPWWFEDLLFLSPLLVEMLVKSMLSRKLDHVVISKFLLYYQKAKFSTVTTDEKCKIIEMILDMHYNLDHGSISCKNLFGILRVTLSLNISKCSRNKLENMIGSHLDQATLDNLLVPSPYGIRYLYDVNLVLRILKAFLHGRTGLVTPIRMRKVAGLIDLYIAEIAPDPSLKTSKFLALATALPDSARDSYDELYHAVDMYLEVHAQLSQEDRMKLCCGLNYEKLSPQACVHLSQNTKFPPKSAVQALISQSSKLNNVLRPTPSTTPYNNWPCSSGKGDKTSEQDVLYDDGNFDISDDNEKLRTHLQGMQCRVMELEKICKKMQSQMRKITKSNVSGQSNNARSLPKLCS 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0430 564 Gene3D Potassium Channel Kv1.1; Chain A 24 143 IPR011333 -
Lal2g0430 564 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 37 564 - -
Lal2g0430 564 SMART BTB_4 32 133 IPR000210 GO:0005515
Lal2g0430 564 PANTHER OS12G0117600 PROTEIN 37 564 IPR043454 -
Lal2g0430 564 Pfam NPH3 family 218 444 IPR027356 -
Lal2g0430 564 ProSiteProfiles BTB domain profile. 32 96 IPR000210 GO:0005515
Lal2g0430 564 ProSiteProfiles NPH3 domain profile. 217 468 IPR027356 -
Lal2g0430 564 MobiDBLite consensus disorder prediction 544 564 - -
Lal2g0430 564 Pfam BTB/POZ domain 31 130 IPR000210 GO:0005515
Lal2g0430 564 Coils Coil 520 547 - -
Lal2g0430 564 MobiDBLite consensus disorder prediction 472 495 - -
Lal2g0430 564 SUPERFAMILY POZ domain 29 129 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0430 Lal-Chr2 2574832 2578209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0430 44 543 EF-hand Containing Proteins AT3G44820 28.210 3.65e-62 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0430 - - gmx:100784792 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0430 2 2574832 2578209 Lal9g0396 9 2632278 2635613 LSH