Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0412 ATGATGTATATAAGTGCATCTTCTCTTCTCAGATCAACCAGGTCCAAACTTTCATCTTCTTCTCTTTCTAGAACCTTCTCTAATCATCACCCTTCTTCGACATCCCGTTCTTTTTCCTCCTCCGCCGCCGCCGCACGATCCTTCTCCTCATCCGTTCCACGGTGGAGCCACCGCCTCGATTGGCGCTCTCCCGTCACTCTTCGCCCTCAGATCACAGCCTTTGCTCCTTTCATCGAACGATTCCATCGCAAGATCGCCACCATGGCTAATGAAAATCCTTTCAAGGGAAACTTGACAAGCCTCCCCAAGCCCAGCGGTGGCGAGTTTGGGAAATTCTACAGTCTTCCTTCTCTCAATGATCCAAGAATCGACAGGTTGCCATACTCTATCAAAATTCTCCTTGAATCCGCCATTCGTAATTGTGACAATTTCCAAGTCACTAAAGAAGATGTTGAGAAGATCATTGACTGGGAAAATAGTTATACTAAGCAAGTTGAGATTCCATTCAAGCCTGCTCGCGTTCTCTTACAGGATTTTACTGGAGTCCCAGCTGTTGTTGACCTTGCTTGCATGCGTGATGCGATGAATAAGCTTGGCGGTGATTCTAATAAGATTAATCCTCTGATAAAAGAAGTTTTGAATCTCATGTATTACTCCAATAACAGTCACTTTTCTACTTATACTTTGATGCATCTAGATGTTCCTGTTGATCTTGTGGTTGATCATTCAGTTCAAGTGGATGTTGCAAGGTCTGAAAATGCCGTTCAGGCCAATATGGAGCTTGAATTCCAAAGAAACAAGGAGAGGTTTGCTTTTCTTAAGTGGGGGTCAACTGCGTTCCGTAACATGCTTGTTGTTCCTCCAGGTTCTGGTATAGTACACCAGGTCAATCTTGAATATCTTGGACGGGTTGTTTTCAACAATGAGGGCTTACTCTATCCTGACAGTGTGGTTGGGACTGATTCACATACAACCATGATAGATGGGCTTGGTGTTGCTGGATGGGGTGTTGGAGGTATTGAGGCTGAGGCAGCAATGCTTGGCCAGCCAATGAGCATGGTGTTGCCTGGTGTTGTTGGGTTCAAGTTATCTGGAAAATTGCAGGATGGTGTTACAGCGACTGACTTGGTTCTAACTGTAACACAAATTCTTAGGAAGCATGGGGTTGTTGGGAAGTTTGTTGAATTTTATGGTGATGGTATGGGTAAATTATCTTTAGCTGACAGGGCCACTATTGCTAACATGTCTCCTGAATATGGTGCCACCATGGGTTTCTTCCCTGTGGATCATGTTACATTACAATATCTCAAATTAACCGGAAGAAGTGATGAAACTGTAGCCATGATAGAGTCTTATCTCAGGGCAAACAACATGTTTGTTGACTATAATGAGCCTCAACAAGACAGAGCTTATTCATCGTATCTTGAATTAAACCTTTCCGATGTTGAACCATGTATCTCAGGACCGAAGAGACCTCATGATCGAGTGCCTTTGAAAGAAATGAAGGCAGACTGGCATTCTTGTCTTGATAACAAAGTTGGGTTTAAGGGATTTGCTATACCAAAAGAGGCACAAGGGAAAGTTGCAAAATTTGATTTCCAGGGACAGCCAGCGGAGCTCAAGCATGGCAGTGTTGTGATTGCTGCAATCACAAGCTGTACAAATACGTCAAACCCAAGTGTTATGCTTGGAGCTGGTCTTGTTGCAAAAAAGGCTCATGAGCTTGGTTTGCAGGTCAAGCCTTGGGTTAAAACAAGTCTTGCTCCAGGCTCTGGAGTTGTTACAAAATATCTACTCCAGAGTGGACTCCAGAAATATCTAAACGAACAAGGTTTTCATATTGTTGGATTTGGCTGTACAACATGTATTGGCAATTCAGGGGACTTGAATGAATCTGTTTCTTCTGCCATCTCAGAAAATGATATTGTAGCGGCTGCTGTGTTGTCTGGGAACCGTAATTTTGAGGGTCGTGTGCATCCCTTGACAAGAGCTAACTATCTTGCCTCGCCTCCTTTAGTTGTTGCTTATGCTCTTGCTGGCACGGTGGACATTGATTTTGAGAAAGAGCCAATTGGAACAGGTAAGGATGGCAAGAATGTGTTTTTGAGGGATATCTGGCCATCTAACGAAGAAATTGCAGAGGCTGTCCAATCTAGCGTATTGCCTGACATGTTCCGTAGTACATATGAGGCTATCACCAAGGGCAACCCTATGTGGAATCAACTAGAAGTTCCTGTTGACAAACTCTATTCATGGGACCCCAAATCAACATATATTCACGAACCCCCATACTTCAAGAGCATGACCATGGATCCTCCTGGAGCTCATGGTGTGAAAGATGCTTATTGTCTGCTGAATTTTGGTGACAGTATAACCACTGATCACATATCTCCAGCTGGAAATATTCAAAAGGACAGTCCTGCTGCTAAATTCCTTGTGGAGCATGGGGTGGAACGCAAGGACTTCAATTCTTATGGAAGTCGTCGTGGCAATGATGAAGTGATGGCAAGGGGAACTTTTGCCAACATTCGCCTTGTTAACAAGCTCTTGAATGGGGAAGTTGGTGCCAAGACAGTTCACATTCCTACAGGGGAGAAGCTTTATGTGTTTGATGCAGCAATGAGATACAAAACCGCTGGGCAAGACACCGTTGTGCTGGCTGGAGCTGAATATGGTAGTGGAAGCTCTAGAGATTGGGCTGCCAAGGGTCCAATGCTATTGGGAGTCAAAGCTGTAATAGCTAAAAGTTTTGAGAGAATTCATCGCAGTAATTTGGTAGGAATGGGCATTATTCCTCTTTGCTTCAAATCGGGTGAGGATGCTGACACATTAGGATTGACTGGTCATGAACGTTATACAATTGATCTCCCAAGTAAAATCAGTGAGATTAGGCCTGGCCAAGATGTCACAGTCACAACTGATAATGGAAAATCCTTCACCTGCACAGTACGCTTTGACACTGAGGTTGAACTTGCCTACTTCAACAATGGTGGCATTCTTCCGTATGTCATAAGGAACCTCATTAAGCAGTGA 3033 0.4402 MMYISASSLLRSTRSKLSSSSLSRTFSNHHPSSTSRSFSSSAAAARSFSSSVPRWSHRLDWRSPVTLRPQITAFAPFIERFHRKIATMANENPFKGNLTSLPKPSGGEFGKFYSLPSLNDPRIDRLPYSIKILLESAIRNCDNFQVTKEDVEKIIDWENSYTKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLIKEVLNLMYYSNNSHFSTYTLMHLDVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLQDGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMGKLSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIESYLRANNMFVDYNEPQQDRAYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAIPKEAQGKVAKFDFQGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGFGCTTCIGNSGDLNESVSSAISENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNVFLRDIWPSNEEIAEAVQSSVLPDMFRSTYEAITKGNPMWNQLEVPVDKLYSWDPKSTYIHEPPYFKSMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGNIQKDSPAAKFLVEHGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGAKTVHIPTGEKLYVFDAAMRYKTAGQDTVVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPSKISEIRPGQDVTVTTDNGKSFTCTVRFDTEVELAYFNNGGILPYVIRNLIKQ 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0412 1010 ProSitePatterns Aconitase family signature 2. 611 624 IPR018136 -
Lal2g0412 1010 CDD AcnA_IRP_Swivel 786 956 IPR044137 -
Lal2g0412 1010 Gene3D Aconitase, domain 4 773 1009 IPR015928 -
Lal2g0412 1010 Gene3D Aconitase, domain 3 220 484 IPR015931 -
Lal2g0412 1010 Gene3D Aconitase, domain 3 91 217 IPR015931 -
Lal2g0412 1010 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 56 1010 IPR006249 -
Lal2g0412 1010 Pfam Aconitase C-terminal domain 809 936 IPR000573 -
Lal2g0412 1010 ProSitePatterns Aconitase family signature 1. 545 561 IPR018136 -
Lal2g0412 1010 CDD AcnA_IRP 173 682 - -
Lal2g0412 1010 Gene3D Aconitase, domain 3 485 708 IPR015931 -
Lal2g0412 1010 SUPERFAMILY LeuD/IlvD-like 749 1008 - -
Lal2g0412 1010 Gene3D - 709 770 - -
Lal2g0412 1010 Pfam Aconitase family (aconitate hydratase) 223 680 IPR001030 -
Lal2g0412 1010 Pfam Aconitase family (aconitate hydratase) 152 211 IPR001030 -
Lal2g0412 1010 TIGRFAM aconitase_1: aconitate hydratase 1 233 1008 IPR006249 -
Lal2g0412 1010 SUPERFAMILY Aconitase iron-sulfur domain 105 745 IPR036008 -
Lal2g0412 1010 PANTHER ACONITATE HYDRATASE 56 1010 - -
Lal2g0412 1010 PRINTS Aconitase family signature 259 272 IPR001030 -
Lal2g0412 1010 PRINTS Aconitase family signature 283 291 IPR001030 -
Lal2g0412 1010 PRINTS Aconitase family signature 312 325 IPR001030 -
Lal2g0412 1010 PRINTS Aconitase family signature 326 341 IPR001030 -
Lal2g0412 1010 PRINTS Aconitase family signature 388 401 IPR001030 -
Lal2g0412 1010 PRINTS Aconitase family signature 402 415 IPR001030 -
Lal2g0412 1010 PRINTS Aconitase family signature 484 498 IPR001030 -
Lal2g0412 1010 PRINTS Aconitase family signature 549 560 IPR001030 -
Lal2g0412 1010 PRINTS Aconitase family signature 611 624 IPR001030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0412 Lal-Chr2 2467694 2476242 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0412 K01681 - gmx:100778506 1746.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0494 1 3147666 3161907 Lal2g0412 2 2467694 2476242 LSH