Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0494 ATGTATATAACTACCTATTCTTCTTCATATTCTCTTCTTAGAGCAACCAGATCTAAAATTATATCTTCTTCTCTTTCTAGAACCTTCTCTTATCATTCTTCTTCAACATGTCGCTCATTCTCCTCCGCCACCGCTCGATCCTTCTGCTCCTCCGTTCCCCGCTGGAGCCACCGCCTCGATTGGCGCTCTTCGTTCACTCCTCGCTCTCAGATCAGAGCCGTCGCTCCTGTCATCGAACGATTCCACCGCAAGATCGCCACCGTTGGTACTATTTCATCTCCTTCTAGCTCCGATAATTTTGGAACGTTTATTCCGTTCTCTAATGAAAATCCTTTCAAGGGAAACTTGACAAGCCTCCCCAAGCCCAGCGGTGGCGAGTTTGGGAAATTCTACAGTCTTCCTTCTCTGAATGATCCAAGAATCGACAGGTTGCCATACTCTATCAGAATTCTCCTCGAATCTGCCATTCGTAATTGTGACAATTTCCAAGTCACCAAAGAAGATGTTGAGAAGATCATTGACTGGGAAAACAGTTATACAAAGCAAGTTGAAATTCCTTTCAAACCTGCTCGTGTTCTCTTGCAGGATTTTACTGGAGTCCCAGCTGTTGTTGACCTGGCTTGCATGCGTGATGCAATGAATAAGCTTGGCGGTGATTCTAATAAGATCAATCCTCTGGTTCCTGTTGATCTTGTCGTTGATCATTCTGTTCAAGTGGATGTAGCAAGGTCTGAAAATGCAGTGCAGGCCAATATGGAGCTTGAATTCCAAAGAAACAAGGAGAGATTTGCTTTTCTGAAATGGGGGTCAACTGCGTTCCGCAATATGCTTGTAGTTCCTCCAGGTTCTGGCATAGTACATCAGGTCAATCTTGAATATCTTGGACGGGTTGTTTTCAACAATGAGGGTTTACTCTATCCTGACAGTGTGGTTGGGACTGATTCACATACCACTATGATAGATGGGCTTGGTGTTGCTGGATGGGGTGTTGGAGGTATTGAGGCTGAGGCAGCAATGCTTGGCCAGCCTATGAGCATGGTGTTGCCTGGTGTTGTTGGGTTCAAGTTATCTGGAAAATTGCGGGATGGTGTTACAGCAACTGACTTGGTTCTAACTGTAACTCAAATTCTTAGGAAGCATGGCGTTGTTGGAAAATTTGTTGAATTTTATGGTGATGGTATGGGTAAATTATCTTTAGCTGACAGGGCTACTATTGCTAACATGTCTCCTGAATATGGTGCTACCATGGGCTTTTTCCCCGTGGATCATGTTACATTACAATATCTCAAATTAACTGGAAGAAGTGATGAAACTGTGGCCATGATAGAGTCTTATCTCAGGGCAAACAACATGTTTGTTGACTATAATGAGCCACAACAAGACAGAGTTTATTCATCGTATCTTGAATTAAACCTATCCGATGTTGAACCATGCATCTCAGGACCGAAGAGACCTCATGATCGGGTGCCTTTGAAAGAAATGAAGGCTGACTGGCATTCTTGTCTTGATAGCAAAGTTGGATTTAAGGGATTTGCTATACCAAAAGAAGCACAAGGAAAAGTTGCAAAATTTGATTTCCATGGGCAGCCAGCGGAGCTCAAGCATGGCAGTGTTGTGATTGCTGCAATCACAAGTTGTACAAACACCTCAAACCCAAGTGTTATGCTTGGAGCTGGTCTGGTTGCAAAAAAGGCCCACGAGCTTGGTTTGCAGGTCAAGCCTTGGGTTAAAACAAGTCTTGCTCCAGGCTCTGGAGTTGTTACAAAATATCTACTCCAGAGTGGACTCCAGAAATATCTAAATGAACAAGGTTTTCACATTGTTGGGTTTGGCTGTACAACATGTATTGGCAATTCTGGGGACCTGAATGAATCCGTTGCCTCTGCCATCTCGGAAAATGATATTGTAGCGGCTGCTGTGTTGTCTGGAAACCGTAATTTTGAGGGCCGTGTGCATGCCTTGACAAGAGCTAACTACCTTGCCTCACCTCCTCTAGTTGTTGCTTATGCCCTTGCTGGCACGGTTGACATTGATTTTGAGAAAGAACCAATTGGAACAGGGAAGGATGGCAAGAATGTTTTCTTGAGGGATATCTGGCCATCTAATGAGGAAATTGCAGAGGCTGTCCAATCTAGTGTGTTGCCTAACATGTTCCGTAGCACATATGAGGCTATTACCAAGGGCAACCCTATGTGGAATCAATTACAAGTTCCAGCTGACAAACTCTACTCATGGGACACCAACTCAACATATATTCATGAACCCCCATACTTCAAGAGCATGACCATGGATCCTCCTGGAGCTCATGGTGTGAAAGATGCTTATTGCTTGCTGAATTTTGGTGACAGTATAACCACTGATCACATATCTCCAGCTGGAAGCATTCAAAAGGACAGTCCTGCTGCTAAATACCTTCTGGAGCGTGGGGTGGATCGCAAGGACTTCAATTCATACGGAAGCAGGCGTGGCAATGATGAGGTGATGGCAAGGGGAACTTTTGCCAACATTCGCCTTGTTAACAAGCTTCTGAATGGTGAAGTCGGTGCCAAGACAGTTCACATTCCTACAGGGGAGAAGCTTTATGTGTTTGAAGCAGCAATTAGATACAAATCTGCTGGGGAAGACACCATTGTGATTGCTGGAGCTGAATATGGCAGTGGAAGTTCTAGAGATTGGGCTGCCAAGGGTCCAATGCTATTGGGAGTCAAAGCTGTAATAGCTAAAAGCTTTGAGAGAATTCATCGCAGTAATTTGGTAGGAATGGGCATTATTCCACTTTGCTTCAAATCCGGTGAAGATGCTGATACATTAGGATTGACTGGCCATGAACGTTATACAATTGACCTACCAAGTAAAATCAGTGAGATTAGGCCTGGCCAAGATGTCACAGTCACAACTGATAATGGAAAATCTTTCACCTGCACAGTACGCTTTGACACTGAGGTTGAACTTGCCTACTTCAATCACGGTGGTATTCTTCCATATGTCATCAGGAACCTGATTAAGTATGCACTCGATTTCCATAAAGAATTTCAAGATTTGAGACACACTGGTTCCATGTCTTTTGATCCTAGAAACAAAAGGAAAATTGAGATTGAATCAATGAATCATATATCGGTTAAAATTCGTTGGCGCATTAGAAGTGCAGCATTTGTGGTTGTTCCATTTTGTCTCTTCTCTCTATTCTCTTCATCACCAACCATGTCTTCACTCTTCAGATCTAACAACACCAAACTCTTCTCTACCTCTCTTTCTAGAACCTTCTCTTCCCTTCCCCGTTCCTCCGATCACTTCCACCGCACCACCGCTACTCTCTCTCCCGTCAAAGCTGGTGCTGAATTTTATGATCTGATTGTTCATTTCACTCATTTGACGCCTATTGTCATTTCAGCGAATGAAAATCCTTCCAAGGGAAATTTCATCGCCAAACTTGGAGGTGATTCTATTGATAAGAATAAGTTCAATAATCCTATGTTGAGTTTTCACTCATGTCAGAGATTCAAGGCTTCTGGACAGGACACTAATGTGCTGGCTGGAGCTGGATATGTTAACGGAAGTTCCAGAATCTGGGCTGCCAAGAGTCCAATGCTATTGGGAGTCAATGCTGTGATGGCTAGAAGTCTTGAGAGAAGTATGGATAGTAACACATTGGGATTGACTGGTCATAAACGCCTTATGAGCGACGCCACAGGTACAATCAGCGAGACAAGGGCGTATGGTTTTCGGCCATTATCTCCTCATCTTCCTGTTTATCAGCCACAGCTATCTTCGACGCTTTCAATTTTCAATAGAATCTCTGGAGCTCTCCTATCCACTGTCATTTTGCTATTTTATATGATATATATGAAAATTGGTTTGATCAGCCTCAGCTATGATTCTTTCTACCAGTTCTTGTTTTATTCATCAAAACTCAACCTACTTGCTGTTGAGATTTCTGGTTTAGCCCTGTCCTATCATCTGTATGCTGGAATTCGTCATTTAGTCCACAAGTTGTGA 3996 0.4337 MYITTYSSSYSLLRATRSKIISSSLSRTFSYHSSSTCRSFSSATARSFCSSVPRWSHRLDWRSSFTPRSQIRAVAPVIERFHRKIATVGTISSPSSSDNFGTFIPFSNENPFKGNLTSLPKPSGGEFGKFYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWENSYTKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMGKLSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIESYLRANNMFVDYNEPQQDRVYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKADWHSCLDSKVGFKGFAIPKEAQGKVAKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGFGCTTCIGNSGDLNESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNVFLRDIWPSNEEIAEAVQSSVLPNMFRSTYEAITKGNPMWNQLQVPADKLYSWDTNSTYIHEPPYFKSMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIQKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGAKTVHIPTGEKLYVFEAAIRYKSAGEDTIVIAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPSKISEIRPGQDVTVTTDNGKSFTCTVRFDTEVELAYFNHGGILPYVIRNLIKYALDFHKEFQDLRHTGSMSFDPRNKRKIEIESMNHISVKIRWRIRSAAFVVVPFCLFSLFSSSPTMSSLFRSNNTKLFSTSLSRTFSSLPRSSDHFHRTTATLSPVKAGAEFYDLIVHFTHLTPIVISANENPSKGNFIAKLGGDSIDKNKFNNPMLSFHSCQRFKASGQDTNVLAGAGYVNGSSRIWAAKSPMLLGVNAVMARSLERSMDSNTLGLTGHKRLMSDATGTISETRAYGFRPLSPHLPVYQPQLSSTLSIFNRISGALLSTVILLFYMIYMKIGLISLSYDSFYQFLFYSSKLNLLAVEISGLALSYHLYAGIRHLVHKL 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0494 1331 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 95 1001 IPR006249 -
Lal1g0494 1331 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 1160 1219 IPR006249 -
Lal1g0494 1331 Gene3D Aconitase, domain 3 478 701 IPR015931 -
Lal1g0494 1331 PANTHER ACONITATE HYDRATASE 95 1001 - -
Lal1g0494 1331 PANTHER ACONITATE HYDRATASE 1160 1219 - -
Lal1g0494 1331 SUPERFAMILY LeuD/IlvD-like 742 1001 - -
Lal1g0494 1331 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 1229 1331 IPR034804 GO:0016020
Lal1g0494 1331 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 1238 1329 IPR034804 GO:0016020
Lal1g0494 1331 SUPERFAMILY Aconitase iron-sulfur domain 123 738 IPR036008 -
Lal1g0494 1331 PRINTS Aconitase family signature 252 265 IPR001030 -
Lal1g0494 1331 PRINTS Aconitase family signature 276 284 IPR001030 -
Lal1g0494 1331 PRINTS Aconitase family signature 305 318 IPR001030 -
Lal1g0494 1331 PRINTS Aconitase family signature 319 334 IPR001030 -
Lal1g0494 1331 PRINTS Aconitase family signature 381 394 IPR001030 -
Lal1g0494 1331 PRINTS Aconitase family signature 395 408 IPR001030 -
Lal1g0494 1331 PRINTS Aconitase family signature 477 491 IPR001030 -
Lal1g0494 1331 PRINTS Aconitase family signature 542 553 IPR001030 -
Lal1g0494 1331 PRINTS Aconitase family signature 604 617 IPR001030 -
Lal1g0494 1331 ProSitePatterns Aconitase family signature 2. 604 617 IPR018136 -
Lal1g0494 1331 SUPERFAMILY LeuD/IlvD-like 1157 1216 - -
Lal1g0494 1331 CDD AcnA_IRP_Swivel 779 949 IPR044137 -
Lal1g0494 1331 CDD AcnA_IRP 191 675 - -
Lal1g0494 1331 Gene3D - 702 763 - -
Lal1g0494 1331 CDD SQR_TypeC_SdhC 1242 1328 - -
Lal1g0494 1331 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1242 1328 IPR000701 GO:0016627
Lal1g0494 1331 Gene3D Aconitase, domain 4 1101 1220 IPR015928 -
Lal1g0494 1331 Gene3D Aconitase, domain 3 109 477 IPR015931 -
Lal1g0494 1331 TIGRFAM aconitase_1: aconitate hydratase 1 128 1001 IPR006249 -
Lal1g0494 1331 ProSitePatterns Aconitase family signature 1. 538 554 IPR018136 -
Lal1g0494 1331 Pfam Aconitase family (aconitate hydratase) 170 673 IPR001030 -
Lal1g0494 1331 Pfam Aconitase C-terminal domain 1162 1217 IPR000573 -
Lal1g0494 1331 Pfam Aconitase C-terminal domain 802 929 IPR000573 -
Lal1g0494 1331 Gene3D Aconitase, domain 4 766 1002 IPR015928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0494 Lal-Chr1 3147666 3161907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0494 K01681 - gmx:100778506 1776.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0494 1 3147666 3161907 Lal1g0494 1 3147666 3161907 ECH
Lal1g0494 1 3147666 3161907 Lal2g0412 2 2467694 2476242 LSH