Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0372 ATGGAAGAACCCAATTCAAAACCTGTCTTGATCAGAGAAGTGTGGGCCAAAAATCTTGAATCTGAATTCAGTCTCATTCGTCAACTTATCCCTCAATACCCATTTGTATCAATGGATACTGAATTTCCCGGTGTTATTTTTAAACAACAAATTCTCACAAAAAGTTATCACCACCAGAACCTGCATCCCTTGGATGAATACAACCTTCTCAAAGCCAACGTCGATTCACTTAATCTCATCCAAGTTGGTCTTACCCTCTCTGACGTAGCTGGCAATCTTCCTCACCTTGGAACCAATAACTCCTTCATCTGGCAATTCAACTTTCGTGACTTTGATGTGGCGCGTGATAAACACGCTACTGACTCAATTGCTCTCCTCCGTAAACAAGGTATCGATTTCGAGCGCAATGTTGTGGACGGTGTTGATTCCGTACACTTTGCTGCAATGATGTTTTCTTCTGGGCTCCTCTACAACAAAGCCGTGACTTGGGTGACTTTCCACAGTGCACACGATTTTGGATATATGGTGAAGATTTTGACACATAGGACATTACCAACTAGGTTGGATGAGTTCTTATGGGTGGTGAAGCGGTTATTCGGTAATAAGGTTTATGACATTAAACATATGATCCGTTATTGTGACTCACTTTATGGTGGTTTAGATCGGGTGGCCCAAACCCTCAAAGTGTATCGAGTAGTTGGAAAGTCTCACCAAGCCGGTTCAGACAGTTTACTCACTTGTCATGTATTTCAGAAGATTAGAGACACATATTTTGTGAAGGGGGGACATAAAAAATGTTCGTCAGTGTTGTTTGGGTTAGAGTTAGAGGCATTTCATTCCAGAGTGGTTAATCGTGGTGGAAAAAATAGATTGTGTCCACAAATCAACTTCAGCTACAATGTCTTCATTCCTCAAATTATCACTTTCGGGAAAGCTTTATCCTAA 945 0.4116 MEEPNSKPVLIREVWAKNLESEFSLIRQLIPQYPFVSMDTEFPGVIFKQQILTKSYHHQNLHPLDEYNLLKANVDSLNLIQVGLTLSDVAGNLPHLGTNNSFIWQFNFRDFDVARDKHATDSIALLRKQGIDFERNVVDGVDSVHFAAMMFSSGLLYNKAVTWVTFHSAHDFGYMVKILTHRTLPTRLDEFLWVVKRLFGNKVYDIKHMIRYCDSLYGGLDRVAQTLKVYRVVGKSHQAGSDSLLTCHVFQKIRDTYFVKGGHKKCSSVLFGLELEAFHSRVVNRGGKNRLCPQINFSYNVFIPQIITFGKALS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0372 314 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 5 275 IPR039637 GO:0004535|GO:0030014
Lal2g0372 314 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 5 275 - -
Lal2g0372 314 Gene3D - 1 276 IPR036397 GO:0003676
Lal2g0372 314 Pfam CAF1 family ribonuclease 14 141 IPR006941 -
Lal2g0372 314 SUPERFAMILY Ribonuclease H-like 11 261 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0372 Lal-Chr2 2203816 2204760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0372 K12581 - csin:114287602 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0372 2 2203816 2204760 Lal2g0372 2 2203816 2204760 ECH
Lal25g0075 25 510851 511696 Lal2g0372 2 2203816 2204760 PCT
Lal2g0372 2 2203816 2204760 Lal25g0075 25 510851 511696 PCT