Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0075 ATGTCTTTGTTGAAGGATGACCCTAATTTGAAACCGATTTTGATTCGTGATGTTTGGGCCTCTAACCTTGAAGCTGAGTTCAACCTTATCCGTGACGTCATCGACAATTATCCATTCATCTCAATGGATACTGAATTCCCCGGTGTTATCTTCCGTCCTCCGACCGGATCTTCCTTCAGCCACCTCCACCCCTCCGATCACTACCGCTTCCTCAAGTCTAACGTTGACTCTCTCAACTTAATCCAGCTCGGTCTCACACTCTCCGACGTCAACGGTAATCTACCGGATCTCGGCACCGCCACAAATCGCTTCATATGGCAGTTCAACTTTAGTGACTTTGATGTGGCGCGTGACCCTCACGCTCCAGACTCGATCGACCTCCTCCGTCGCCAGGGGATTGACTTCAGCCGAAACGTGGAGGAAGGAGTTGATTCGGCGCAGTTCGCAGAGCTGATGATGTCGTCGGGGATTGTGTGCAATGAGGATGTGAGTTGGGTGACTTTTCATAGCGCGTATGATTTCGCGTACCTGATGAAGGTTTTAACTCGACGCGCCTTGCCGAGTGGTTTAAAGGAGTTTATGAAAATGATGAAGGTGTTTTTCGGAAACAACATCTATGATATTAAACACATGACGCGTTTTTGTGAGAATACATTGTATGGCGGTCTGGACCGGGTTGCGAAAACGCTCAATGTGAACCGGGCGGTTGGGAAGTCTCATCAGGCCGGGTCTGATAGCTTGTTGACGTGGCATTCATTTCAGAAAATGAGGGACATGTATTTTATCAACGATGGGGCCCAGAAACATGCTGGGGTATTGTTTGGATTAGAAATATCTCTTCTGTAA 846 0.4799 MSLLKDDPNLKPILIRDVWASNLEAEFNLIRDVIDNYPFISMDTEFPGVIFRPPTGSSFSHLHPSDHYRFLKSNVDSLNLIQLGLTLSDVNGNLPDLGTATNRFIWQFNFSDFDVARDPHAPDSIDLLRRQGIDFSRNVEEGVDSAQFAELMMSSGIVCNEDVSWVTFHSAYDFAYLMKVLTRRALPSGLKEFMKMMKVFFGNNIYDIKHMTRFCENTLYGGLDRVAKTLNVNRAVGKSHQAGSDSLLTWHSFQKMRDMYFINDGAQKHAGVLFGLEISLL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0075 281 Gene3D - 5 279 IPR036397 GO:0003676
Lal25g0075 281 Pfam CAF1 family ribonuclease 18 143 IPR006941 -
Lal25g0075 281 SUPERFAMILY Ribonuclease H-like 15 275 IPR012337 -
Lal25g0075 281 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 278 IPR039637 GO:0004535|GO:0030014
Lal25g0075 281 PANTHER RIBONUCLEASE CAF1, RIBONUCLEASE H-LIKE DOMAIN PROTEIN-RELATED 11 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0075 Lal-Chr25 510851 511696 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0075 K12581 - gmx:100817875 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0075 25 510851 511696 Lal25g0075 25 510851 511696 ECH
Lal25g0075 25 510851 511696 Lal2g0372 2 2203816 2204760 PCT
Lal2g0372 2 2203816 2204760 Lal25g0075 25 510851 511696 PCT