Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0364 ATGATTATGGCGCCTAGAAAACCTCGCCCCCACCGTGATATCCTAATGGATTCGGTGTTTGCGCTTGTCTTTGTTCTCGTCGCTTGCGTCGAGCTCTGTGATGCCGCTACTGTCGTCGACGTTTATCGCCTCATCCAATACGACATGTCCGGTGTGCCGTTTGGTTCTCGATTGGCAAGCCTCAACCATCACGCTGCTTCACTCCACTTCTCTCCTCACTCTGATCTCTCTCGCTCTGTTCTCCTCATCCCTCTTCGCGAACTCAACATATCTTTTGTCAAAGAATACATTTCTGAAAGCAAGCCTCTGGGGGGTTTAATATTTTTGCTGCCCCAAATGTTCAGTTTTGAGAAGAAAGGTGGTGTAGGAAGTAATCATCAAGATGAAAGCAAAGAACTACTGAAGAATGTGCTGGCTGAACTTGAACAAATACTGATACATGCTAACTTACCTTATCCTGTTTATTTTGCCTTTGAGGATGACACCATTGATGCCGTGTTAACTGATATCAAGAAAAATGATGCCAGTGGTCAGCCTGCTACTGCAACTACTGGCGGATACAAATTTGTTGTTTCAGCTCCAGAACCAAAGAAAATTGTATCTCCACCCATTTCAAACATTCAGGGATGGTTGGCAGGACTGAAGACAGATGATAGTGCTCAACAATTACCCACCATTGCGATAGTTGCATCATATGACACCTTTGGGGCAGCTCCTGCATTATCAGTGGGAAGCGATAGTAATGGAAGTGGTGCTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCTCTGTTATATTCTAATCCAAAGACAAGAGGACAATATAATCTGCTGTTTGGGCTAACATCTGGTGGGCCTTACAACTACAATGGAACTCGTAAGTGGCTTCGAAGCTTAGATCAACGTCTCCGTGAGAGCATTGATTATGCTATATGCTTAAACAGTATTGGGTCATGGGAAAATGAATTGTGGGTTCATGTGTCTAAGCCTCCAGAAAATGCCTATGTTAAGCAAATTATGGAAGATTTTTCAGATGTCGCAGAAGAGTTGGGCTTTAAGGTGAATTTGAAGCATAAGAAAATAAATATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACTCTCTCTGAACTCCCTACTGCACCTGAATTTCTAGAAAGCACTGGTGGTTTGGTTGACAGCAGGCATTTTGTCAACGAAATAGCAGTTATCAGAAGCGTGAAATTAATTGCTGAGAGTCTTGCGAGCCATATTTACGGACATCAAGGAAAGAACATCCAAATCTTTGCGGACAACAGTAGTTTAGCTGTAAATCCTTCATATGTTCGATCATGGTTAGATCTTTTCTCCCAAACATCTCGAGTGGCACCATTTTTCTCAAAAGATGACCCTTTCATTGCGTCGCTTAAAAAGGAATTAGAAGAACACACAGATGAGGTCAATGTGCATCGTGACGTGCTAGATGGGATGTTCACTTTCTATGATTCAACAAGAGCAAAGCTTAACATTTATCAGGTTGCCAGTGTCACATTTGACTTACTGTTGCTTCTTGTATTGGGATCGTATTTGATTGTGCTCTTCAGTTTCTTGGTCATCACAACAAGGGGTCTTGATGATTTAATCAGTATATTTAGGCGGCCACCCTCTCGAAAAGTGAAAACTGCCTAA 1698 0.4258 MIMAPRKPRPHRDILMDSVFALVFVLVACVELCDAATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPHSDLSRSVLLIPLRELNISFVKEYISESKPLGGLIFLLPQMFSFEKKGGVGSNHQDESKELLKNVLAELEQILIHANLPYPVYFAFEDDTIDAVLTDIKKNDASGQPATATTGGYKFVVSAPEPKKIVSPPISNIQGWLAGLKTDDSAQQLPTIAIVASYDTFGAAPALSVGSDSNGSGAVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSLDQRLRESIDYAICLNSIGSWENELWVHVSKPPENAYVKQIMEDFSDVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELPTAPEFLESTGGLVDSRHFVNEIAVIRSVKLIAESLASHIYGHQGKNIQIFADNSSLAVNPSYVRSWLDLFSQTSRVAPFFSKDDPFIASLKKELEEHTDEVNVHRDVLDGMFTFYDSTRAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISIFRRPPSRKVKTA 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0364 565 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Lal2g0364 565 PIRSF Nicalin 8 560 IPR016574 GO:0009966|GO:0016020
Lal2g0364 565 PANTHER NICALIN 7 564 - -
Lal2g0364 565 Pfam Nicastrin 226 364 - -
Lal2g0364 565 Coils Coil 476 496 - -
Lal2g0364 565 SUPERFAMILY Zn-dependent exopeptidases 190 391 - -
Lal2g0364 565 PANTHER NICALIN 7 564 IPR016574 GO:0009966|GO:0016020
Lal2g0364 565 CDD M28_nicalin_like 138 431 - -
Lal2g0364 565 Gene3D Zn peptidases 105 469 - -
Lal2g0364 565 ProSitePatterns EF-hand calcium-binding domain. 246 258 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0364 Lal-Chr2 2162500 2170235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0364 1 563 EF-hand Containing Proteins AT3G44330 71.908 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0364 - - gmx:100778865 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0364 2 2162500 2170235 Lal2g0364 2 2162500 2170235 ECH
Lal1g0438 1 2722240 2730088 Lal2g0364 2 2162500 2170235 LSH