Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0438 ATGGCTATGGCGCCAAGAAAACAACGCCCTCATCGTGACATTCTCATGGATTCGGTGATTGCACTTCTCTTCGTCCTCATCGCCTGCGTCGAGCTCTGCGACGGCGCCACCGTCGTCGATGTGTATCGTCTCATCCAATACGACTTGTCCGGTGTGCCATTTGGATCTCGATTGGCGAGCCTCAACCATCACGCTGCTTCTCTTCACTTCTCTCCTCACTCCGATCTCTCACGCTCCGTTCTTCTCATCCCTCTTCGCGAACTCAACATGTCTTTTGTCAAAGAATATATTGCTGAAAGCAAGCCGCTGGGGGGTTTAATATTTTTGCTGCCCCAGATGTTCAATTTTGGTAAGAAAGGTGCTAGTAATCATCAAGATGGAAGCAAAGAGCTTCTGAAGAACATGTTGGCTGAACTTGAACAAATACTGATACATGCTAACTTACCTTATCCTGTTTATTTTGCCTTTGAGGATGACACTATTGATGCTGTGTTAAATGATATCAAGAAGAATGATGCCACTGGTCAGCCTGCTACTGCAACTACTGGCGGATACAAATTTGTTGTTTCAGCTCCAGAACCAAAGAAAGTTGGATCTCCACCTGTCTCAAATATTCAGGGATGGTTGGCAGGATTGAAGACAGATGATGGCACTCATCAATTACCCACCATTGCGATAGTGGCATCATATGACACTTTTGGGGCTGCTCCTGCATTATCAGTGGGAAGCGATAGTAGTGGAAGTGGTGCTGTGGCTCTTCTTGAAGTAGCTAGATTGTTTTCTCTGTTATATTCTAATCCAAGGACAAGAGGACAATACAATCTGCTCTTTGGGCTAACGTCTGGTGGCCCTTACAACTACAATGGAACTCATAAGTGGCTTAGAAGCTTGGATCAACGTCTTCGGGAGAGCATTGATTATGCTATATGCTTAAATAGTATTGGGTCATGGGAAAATGAATTGTGGGTTCATGTGTCTAAGCCTCCAGAAAATGCCTATATTAAACAAATTATGGAAGATTTTTCAGGTGTCGCAGAGGAGTTAGGCTTTAAAGTGAATCTGAAGCATAAGAAAATAAATATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACCGCTGCCACTCTCTCTGAGCTCTCTACTGCACCTGAATTGCTAGAAAGCACTGGGGGTTTGGTTGACAGCAGGCATTTTGTCAACGAAATGGCAGTTATCAGAAGTGTGAAATTAATTGCTGAGAGTCTTGCGAGGCATATTTATGGACATCAAGGAAAGAACATCCAAATCTTTGCGGACAATGGTAGTTTGGCTGTAAATCCTTCATATGTTCGATCATGGTTAGATCTTCTGTCCCAAACATCCCGAGTAGCACCATTTTTCTCAAAAGATGACCCTTTCGTCATGGCCCTTAAAAAGGAATTAGAAGATCACACTGATGAGGTCAATGTGCAGCGTGAAGTGCTAGATGGGGTGTTCACCTTCTATGATTCAACAAGGGCAAAACTTAACATATATCAGGTTGCCAGTGTCACATTTGACTTGCTGTTGCTTCTTGCATTGGGGTCGTATTTGATTGTGCTCTTCACTTTCTTGGTCATCACAACTAGGGGTCTTGATGATTTAATCAGTATATTTCGGCGGCCACCCTCTCGAAAAGTGAAGAGTGCCTAA 1692 0.4368 MAMAPRKQRPHRDILMDSVIALLFVLIACVELCDGATVVDVYRLIQYDLSGVPFGSRLASLNHHAASLHFSPHSDLSRSVLLIPLRELNMSFVKEYIAESKPLGGLIFLLPQMFNFGKKGASNHQDGSKELLKNMLAELEQILIHANLPYPVYFAFEDDTIDAVLNDIKKNDATGQPATATTGGYKFVVSAPEPKKVGSPPVSNIQGWLAGLKTDDGTHQLPTIAIVASYDTFGAAPALSVGSDSSGSGAVALLEVARLFSLLYSNPRTRGQYNLLFGLTSGGPYNYNGTHKWLRSLDQRLRESIDYAICLNSIGSWENELWVHVSKPPENAYIKQIMEDFSGVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPELLESTGGLVDSRHFVNEMAVIRSVKLIAESLARHIYGHQGKNIQIFADNGSLAVNPSYVRSWLDLLSQTSRVAPFFSKDDPFVMALKKELEDHTDEVNVQREVLDGVFTFYDSTRAKLNIYQVASVTFDLLLLLALGSYLIVLFTFLVITTRGLDDLISIFRRPPSRKVKSA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0438 563 PANTHER NICALIN 5 562 - -
Lal1g0438 563 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Lal1g0438 563 Coils Coil 474 494 - -
Lal1g0438 563 PANTHER NICALIN 5 562 IPR016574 GO:0009966|GO:0016020
Lal1g0438 563 PIRSF Nicalin 5 558 IPR016574 GO:0009966|GO:0016020
Lal1g0438 563 Gene3D Zn peptidases 125 389 - -
Lal1g0438 563 SUPERFAMILY Zn-dependent exopeptidases 147 407 - -
Lal1g0438 563 Pfam Nicastrin 224 361 - -
Lal1g0438 563 CDD M28_nicalin_like 136 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0438 Lal-Chr1 2722240 2730088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0438 1 561 EF-hand Containing Proteins AT3G44330 71.781 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0438 - - gmx:100778865 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0438 1 2722240 2730088 Lal1g0438 1 2722240 2730088 ECH
Lal1g0438 1 2722240 2730088 Lal2g0364 2 2162500 2170235 LSH