Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0352 ATGGCGGTTAGGGCAACGGTGTCGCGATTCCCAATCGATACCGACGCACGCGAGGGTTCCGGCCTCCTATGGGGAGTAACCGTCAATCCTTTCGCCGCCGTCGACGAGAACGGTCAATCTCCGGCATACGGATCCGGCGGTGACCTTCTCCCCCGATGCGAGAACTGCTATGCCTACTTCAATACATTCTGCGAGCTTGAACAATGGTCGTGGTCATGCTCTCTCTGCGGCACTCTTAACGGCCTTTCCTCCGACGCTATTGAACGCTATTCTCGCCCTCAATCTTGCGCCGAGATGATGTCATCTTTCGTAGATCTCGAATTGCCACAAGAAGAATCAGCGGATGGAGGAGGTGCAGTGCAAGCATGTCCTGTATATGTTGCTGCTGTTGACTTGTCTTCTTCGGAAGAGTTTCTTGAACTCACTAAAAGTGCATTGCTGGCTGCTTTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCACAAACTAGGGCTGTATGATGTTCAAGGTCCTATACCTGTTGTCAAAAATGTTTTCATCCCTCCCGACGCAGAGGGAACCTTGCCAATTGAGCTTGAAGATGTCATGCCTTTGTTACAGTTTCTGGCTCCTGTGGAAAATTGTAAGGACCGTATTGCATCGGCACTTGAAACACTTAGACCAACAACTTCGTGGGAGAGAACGACAGCAGCAGGTCAAGGACTGGATGGCGTTCTGTTAGGTGGGCGTGGATTTGGGGTTGCAATGGAAGCCCTTTGCAATTACCTTGGATCTGAATATGGGAACACCTTTGCTTTAGCTAGAGTCTTTGCCTTCTTGTCGGGTCCCCCTGATTATGGTGCTGGACAGTTGGATACAAGACGATATGGTGAGCAATATGCAAGCAAAGGAGAAGATGCAGACCGCGCTTTACTTCCAGAGCAGACACCATTTTATAAAGATCTGGCTGCCGTTGCTGTTCAAGCAGGTGTCTGTGTGGACATATTTGCTGTGACAAATGAGTACACAGATTTGGCATCCCTAAAATTTCTGAGTATTGAAAGTGGGGGTTCCTTATTTTTGTATACAAGTACCGAGGATTCAACTTTGCCTCAGGACATTTATCGAATGCTGAGTCGGCCATATGCTTTTGGTTGTGTCCTCCGAATGAGAACCTCAACCGAATTTAAACCTGGAAATTCTTATGGTCACTTCTTCCCAGATCCACAGTATGAAAATGTTCAACACATCATATGTTGTGATTCTTATGCTACGTATGCTTATGACTTTGTTTTTGAGAACAATGTTGGATTTTCAAGATCACAATCAGATGTTCCTACAATTCAGATTGCATTTCAGTATGCAGTTGTAGTTCCTCCTGTGGATCTTCCGGATTCGGAAGGGGTTTCTACAAGTAGAACCACACATTCCCTTAAACGCCGGCTGAGGATCCGAACATTGCAGTTCGGTGTTGCTAAAAACATTCATGAACTTTATGACAGCTGTGATCCTGAAGTTATGCTATCGTTGCTTGTTCACAAGGTTATATTAGTCTCTTTGGAGGAAGGAGTTCGGGAGGGTAGGATTTTGCTTCAAGAATGGCTAGTGATCCTCACAGCTCAGTACAATGATGCTTATAAACTTATTCAGTATAGTAATGGAAGTTCCATCAGATCACAGATTGATGTTGTGTTCTCTCAATGTCCTCAACTGCAGCCCTTACCACGTCTAATTTTTGCTCTCCTTCGTAATCCTCTTCTACGTTTTCATGAAGAAGGCGTTCACCCTGACTTTCGCATCTATCTTCAGTGCCTTTTCAGTGTGCTGGAACCAAGTTCTCTTCACCGTGCAGTGTATCCAGTGTTGACATCATATGCCAATCCTGATAAACAAGCATATCCTCGCCATTCATTAAGCCGCGCTGCACTAATTACCAGTGGCAGTCCAATATTTTTCCTTGATGCATTCACAACTCTGATTGTGTTTTATTCTTCGACTGCAGACCCTGCACTTCCTTTTCCTCCACCTCATGATTGTTTGTTAAGGTCTATCATCAACAAATTGAAGCAAGAGAGATGCATCACTCCCAAGCTCATTTTTATTCGAGGAGGGCATGATGATGCCTCAATTTTTGAGAATTTTCTGATTGAGGAGCAGGATGTTGATGGGAGTGGTCTTACAAGTGTGATGGGTTTTGTTTCCTTCCTTGAAGATATTACTCAGAAAGTTTTGGAGTTCATGAAGTAG 2241 0.4511 MAVRATVSRFPIDTDAREGSGLLWGVTVNPFAAVDENGQSPAYGSGGDLLPRCENCYAYFNTFCELEQWSWSCSLCGTLNGLSSDAIERYSRPQSCAEMMSSFVDLELPQEESADGGGAVQACPVYVAAVDLSSSEEFLELTKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPDAEGTLPIELEDVMPLLQFLAPVENCKDRIASALETLRPTTSWERTTAAGQGLDGVLLGGRGFGVAMEALCNYLGSEYGNTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTSTEDSTLPQDIYRMLSRPYAFGCVLRMRTSTEFKPGNSYGHFFPDPQYENVQHIICCDSYATYAYDFVFENNVGFSRSQSDVPTIQIAFQYAVVVPPVDLPDSEGVSTSRTTHSLKRRLRIRTLQFGVAKNIHELYDSCDPEVMLSLLVHKVILVSLEEGVREGRILLQEWLVILTAQYNDAYKLIQYSNGSSIRSQIDVVFSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDFRIYLQCLFSVLEPSSLHRAVYPVLTSYANPDKQAYPRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPALPFPPPHDCLLRSIINKLKQERCITPKLIFIRGGHDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0352 746 SUPERFAMILY vWA-like 124 378 IPR036465 -
Lal2g0352 746 SUPERFAMILY Zn-finger domain of Sec23/24 48 111 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Lal2g0352 746 Pfam Sec23/Sec24 trunk domain 123 374 IPR006896 GO:0006886|GO:0006888|GO:0030127
Lal2g0352 746 Gene3D von Willebrand factor, type A domain 123 380 IPR036465 -
Lal2g0352 746 PANTHER OS05G0443300 PROTEIN 1 744 - -
Lal2g0352 746 SUPERFAMILY beta-sandwich domain of Sec23/24 3 500 - -
Lal2g0352 746 Gene3D Sec23/Sec24 helical domain 472 630 - -
Lal2g0352 746 SUPERFAMILY Helical domain of Sec23/24 501 617 IPR036175 GO:0006886|GO:0006888|GO:0030127
Lal2g0352 746 Pfam Sec23/Sec24 helical domain 501 613 IPR006900 GO:0006886|GO:0006888|GO:0030127
Lal2g0352 746 Gene3D - 30 102 - -
Lal2g0352 746 PANTHER SEC24-RELATED PROTEIN 1 744 - -
Lal2g0352 746 Pfam Sec23/Sec24 zinc finger 51 82 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0352 Lal-Chr2 2115170 2123212 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0352 - - gmx:100807557 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0352 2 2115170 2123212 Lal2g0352 2 2115170 2123212 ECH
Lal2g0352 2 2115170 2123212 Lal9g0334 9 2222153 2228988 LSH