Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0331 ATGCATACTCTCTCTCACCCCTATTCCAATGTTCTCAGTTATTCCAATCACTCTCGCCCTTCTTTTTATCGGGTCGGGGCGACCCGGATTTCCATTAAATGTGGTCACGGGTTTGAATCTGTTTATGGATTCGGATCAGCCCGAAGTGATTGGCTGAGCGACTGCGCTATCTTAACCAGTAAAGTTGATTCACTGAAAGATTCTCATGTCGTCAATGAAAATGGCAACGGCGGTGTTGATCATGTCGCCGCTGTCAACGGCCACACCTCCGCCGTATCTAATCTCAATCTCGTTCCAATCGAAAACAAAAAACAGATTCAGCCTAAACCGCTAACCATCACTGATTTGTCTCCGGCGCCGATACACGGCTCACAGCTGCGGGTAGCGTACCAGGGAGTCCCTGGTGCTTACTCAGAAGCCGCCGCCGGGAAAGCGTATCCAGATAGTCAGGTCATTCCGTGTGACCAGTTCGAGGTGGCGTTCCAAGCGGTGGAGCTATGGATCGCCGATCGGGCGGTTCTACCAGTGGAAAATTCCCTCGGCGGATCGATCCACCGCAACTATGACCTCCTCCTCCGCCACCGCCTCCACATCGTTGGTGAGGTCCAGCTCCCCGTCCACCACTGTCTCCTTGCACTCCCCGACGTTCGAAAAGAGTACTTGACGCGCGTGATCTCACATCCTCAAGCTCTAGCACAATGCGAACACACCTTAACCAAACTCGGTCTCAATGTTGCTCGCGAAGCCGTCGATGACACCGCCGGAGCCGCTGAGTTTGTCGCCGCTAACAACCTCCGCGACACGGCTGCGATCGCTAGCGCACGTGCCGCGGAACTCTACGGTTTAGAAGTTCTGGAAGACGGAATTCAAGATGATCCGAATAACGTGACTCGGTTCGTAATGCTGGCCCGAGAACCCGTAATTCCTCGAACGGATCGACCATTCAAAACTAGTATCGTTTTCGCGCACGATAAGGGAACTTCGGTGCTGTTTAAAGTTCTCTCTGCGTTTGCATTTAGGAATATCAGTTTGACTAAGATTGAGTCAAGGCCTCATCGTAACCGTCCGATTCGAGTGGTGGATGATGAGAGTGAAGGTACTGCGAAGCACTTTGAGTACATGTTTTATGTTGATTTTGAGGCTTCTATGGCTCAAGTTAAGGCACAGAATGCACTTGCAGAGGTTCAAGAATTCACGTCTTTCTTGCGAGTGTTAGGGAGTTACCCTATGGATATGACACCTTGGAACCCATCTTCTCGCCGGGGAGATTAG 1272 0.5134 MHTLSHPYSNVLSYSNHSRPSFYRVGATRISIKCGHGFESVYGFGSARSDWLSDCAILTSKVDSLKDSHVVNENGNGGVDHVAAVNGHTSAVSNLNLVPIENKKQIQPKPLTITDLSPAPIHGSQLRVAYQGVPGAYSEAAAGKAYPDSQVIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPDVRKEYLTRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVAANNLRDTAAIASARAAELYGLEVLEDGIQDDPNNVTRFVMLAREPVIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRVVDDESEGTAKHFEYMFYVDFEASMAQVKAQNALAEVQEFTSFLRVLGSYPMDMTPWNPSSRRGD 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0331 423 ProSitePatterns Prephenate dehydratase signature 2. 344 351 IPR018528 GO:0004664|GO:0009094
Lal2g0331 423 ProSitePatterns Prephenate dehydratase signature 1. 280 302 IPR018528 GO:0004664|GO:0009094
Lal2g0331 423 SUPERFAMILY ACT-like 299 411 IPR045865 -
Lal2g0331 423 CDD ACT_CM-PDT 316 409 - -
Lal2g0331 423 Gene3D - 211 292 - -
Lal2g0331 423 PANTHER AROGENATE DEHYDRATASE 21 419 - -
Lal2g0331 423 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 21 419 - -
Lal2g0331 423 Pfam Prephenate dehydratase 128 306 IPR001086 GO:0004664|GO:0009094
Lal2g0331 423 CDD PBP2_Ct-PDT_like 127 306 - -
Lal2g0331 423 Gene3D - 311 412 - -
Lal2g0331 423 ProSiteProfiles Prephenate dehydratase domain profile. 127 304 IPR001086 GO:0004664|GO:0009094
Lal2g0331 423 SUPERFAMILY Periplasmic binding protein-like II 127 310 - -
Lal2g0331 423 Gene3D - 122 210 - -
Lal2g0331 423 ProSiteProfiles ACT domain profile. 318 409 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0331 Lal-Chr2 2011669 2012940 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0331 K05359 - gmx:100781285 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0331 2 2011669 2012940 Lal2g0331 2 2011669 2012940 ECH
Lal25g0221 25 1523349 1524602 Lal2g0331 2 2011669 2012940 PCT
Lal10g1196 10 18413209 18414462 Lal2g0331 2 2011669 2012940 PCT
Lal2g0331 2 2011669 2012940 Lal25g0221 25 1523349 1524602 PCT
Lal2g0331 2 2011669 2012940 Lal10g1196 10 18413209 18414462 PCT