Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0315 ATGGCAACCATGGCATCCCACACTGTTCTCTCACCTTTCCCTAACCAACTTCTCAAATCTTCCTTCTCAGGTCTTTCCTTCAAGCTATCTCCCCAATCCATAACATTCTCTGCCACCACCGCCGCCGCCGCCTCCAAGCCCCTTACTATTGTCGCCGCCGCTAAGAAAGCTGTCGCCGTCCTCAAGGGAAACTCCGCCGCCGAAGGCGTCGTTACCCTCACCCAAGAAGATGGCGGCCCCACAACAGTTAATGTTCGTATTAGCGGTCTTGCTCCGGGGCTTCATGGTTTTCACTTGCATGAGTATGGTGATACCACCAATGGCTGCATATCAACAGGACCACATTTTAATCCTAGTAAGCTAACACATGGTGCTCCTGAGGATGAAGTCCGTCATGCGGGTGACCTGGGAAACATAGTTGCTAATGCAGATGGGGTTGCAGAGGCAACAATTGTGGATAACCAGATACCACTCACTGGCCCCAATTCAGTAGTTGGAAGAGCCTTAGTGGTTCATGAGCTTGAGGATGACCTTGGAAAGGGTGGCCATGAACTTAGTTTGAGCACTGGAAATGCTGGTGGAAGATTAGCATGTGGTGTGGTTGGTTTGACTCCAGTATAA 621 0.5056 MATMASHTVLSPFPNQLLKSSFSGLSFKLSPQSITFSATTAAAASKPLTIVAAAKKAVAVLKGNSAAEGVVTLTQEDGGPTTVNVRISGLAPGLHGFHLHEYGDTTNGCISTGPHFNPSKLTHGAPEDEVRHAGDLGNIVANADGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTPV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0315 206 Gene3D Superoxide dismutase, copper/zinc binding domain 51 205 IPR036423 GO:0006801|GO:0046872
Lal2g0315 206 PRINTS Cu-Zn-superoxide dismutase family signature 96 118 IPR001424 GO:0006801|GO:0046872
Lal2g0315 206 PRINTS Cu-Zn-superoxide dismutase family signature 132 141 IPR001424 GO:0006801|GO:0046872
Lal2g0315 206 PRINTS Cu-Zn-superoxide dismutase family signature 151 173 IPR001424 GO:0006801|GO:0046872
Lal2g0315 206 PRINTS Cu-Zn-superoxide dismutase family signature 176 202 IPR001424 GO:0006801|GO:0046872
Lal2g0315 206 PANTHER SUPEROXIDE DISMUTASE [CU-ZN] 1 53 204 - -
Lal2g0315 206 SUPERFAMILY Cu,Zn superoxide dismutase-like 56 203 IPR036423 GO:0006801|GO:0046872
Lal2g0315 206 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 53 204 IPR024134 -
Lal2g0315 206 CDD Cu-Zn_Superoxide_Dismutase 69 198 IPR001424 GO:0006801|GO:0046872
Lal2g0315 206 ProSitePatterns Copper/Zinc superoxide dismutase signature 1. 96 106 IPR018152 -
Lal2g0315 206 ProSitePatterns Copper/Zinc superoxide dismutase signature 2. 190 201 IPR018152 -
Lal2g0315 206 Pfam Copper/zinc superoxide dismutase (SODC) 68 201 IPR001424 GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0315 Lal-Chr2 1879366 1882273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0315 K04565 - bvg:104902979 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0315 2 1879366 1882273 Lal2g0315 2 1879366 1882273 ECH
Lal1g0403 1 2477074 2480268 Lal2g0315 2 1879366 1882273 LSH