Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0277 ATGTTTCATAGGCTCAACACTTCAAGGTCTCTTTGTGCTAAGGTATTCAGAACCAAAACTCACTTTGATGCTTTCTCAACTTCCTTGCTCTTCGATGATACTCAGATACAGTTCAAAGAAAGTGTTTCTCAGTTTGCAACGGAAAACATTGTCCCTCATGCTTCAAAAATAGATCACACAAATTATTTTCCAAAGGAGATTAACCTATGGAAAAGCATGGGAGAATTTAATCTCCATGGGATTACTGCACCAGAGGAATATGGAGGGCTTGGTCTAGGGTACTTGTATCACTGTATAGCAATGGAAGAGATTAGCCGTGCTTCTGGATCTGTTGGTCTTTCCTATGGTGCTCATTCTAACCTGTGTATCAATCAGCTGGTGAGGAATGGAAGCCCTGCTCAGAAAGAGAAATACTTGCCAAAGCTTATCTCCGGGGATCATGTGGGAGCTTTGGCAATGAGTGAGCCCAATTCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGGGCTATGTACTTACTGGGAACAAGATGTGGTGCACTAATGGTCCAGTTGCTCAAACATTAGTTGTCTATGCAAAAACTAACATAACAGCTGGGTCAAAAGGAATCACTGCATTCATCGTTGAGAAGGGAATGCCTGGCTTCAGTACTGCCCAGAAATTAGATAAACTTGGGATGCGAGGAAGTGATACATGTGAGCTTGTCTTTGAAAATTGCTTTGTTCCAGAAGAAAATGTTCTTGGGAAAGAGGGGAAAGGAGTCTATGTCATGATGTCTGGGCTGGATTTGGAGAGGCTTGTTTTGGCAGCTGGTCCCCTGGGTATAATGCAGGCATGTCTTGATGTCTCCCTTCCTTATGTTCGACAAAGAGAGCAGTTTGGTCGTCCAATTGGAGAGTTCCAGTTTATTCAGGGAAAAATTGCTGATATGTATACTTCTTTACAGTCTTCAAGGGCTTATGTGTATTCTGTAGCTCGGGACTGTGACAATGGAGAAGTTGACCCAAAGGATTGTGCTGGAGCTATACTTTGTGCTGCAGAAAGAGCAACACAAGTTGCTTTGCAGGCCATACAATGTTTAGGTGGGAATGGTTATGTGAATGAATATCCAACTGGTCGTCTCTTGAGAGATGCCAAACTCTATGAGATTGGTGCAGGAACTAGTGAGATCAGAAGAATGATTATAGGACGTGAGCTCTTCAAATAA 1224 0.4281 MFHRLNTSRSLCAKVFRTKTHFDAFSTSLLFDDTQIQFKESVSQFATENIVPHASKIDHTNYFPKEINLWKSMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRNGSPAQKEKYLPKLISGDHVGALAMSEPNSGSDVVSMKCKADRVDGGYVLTGNKMWCTNGPVAQTLVVYAKTNITAGSKGITAFIVEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGKEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVSLPYVRQREQFGRPIGEFQFIQGKIADMYTSLQSSRAYVYSVARDCDNGEVDPKDCAGAILCAAERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMIIGRELFK 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0277 407 ProSitePatterns Acyl-CoA dehydrogenases signature 2. 364 383 IPR006089 GO:0003995
Lal2g0277 407 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 21 268 IPR009100 GO:0016627
Lal2g0277 407 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 255 406 IPR036250 GO:0016627
Lal2g0277 407 Pfam Acyl-CoA dehydrogenase, middle domain 150 245 IPR006091 GO:0016627
Lal2g0277 407 Pfam Acyl-CoA dehydrogenase, C-terminal domain 257 405 IPR009075 GO:0016627
Lal2g0277 407 Pfam Acyl-CoA dehydrogenase, N-terminal domain 33 146 IPR013786 GO:0016627|GO:0050660
Lal2g0277 407 PANTHER ACYL-COA DEHYDROGENASE 9 407 - -
Lal2g0277 407 Gene3D - 20 147 IPR037069 GO:0016627|GO:0050660
Lal2g0277 407 PIRSF PIGM 31 122 - -
Lal2g0277 407 PIRSF PIGM 158 407 - -
Lal2g0277 407 CDD IVD 31 407 IPR034183 GO:0003995
Lal2g0277 407 ProSitePatterns Acyl-CoA dehydrogenases signature 1. 152 164 IPR006089 GO:0003995
Lal2g0277 407 Gene3D - 262 405 - -
Lal2g0277 407 Gene3D - 149 261 IPR046373 GO:0016627
Lal2g0277 407 PANTHER 2-METHYLACYL-COA DEHYDROGENASE, MITOCHONDRIAL 9 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0277 Lal-Chr2 1625102 1630933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0277 32 407 Acyl Lipid Metabolism Gene Families AT3G45300 88.032 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0277 K00253 - gmx:100794259 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0277 2 1625102 1630933 Lal2g0277 2 1625102 1630933 ECH
Lal1g0371 1 2237137 2243152 Lal2g0277 2 1625102 1630933 LSH