Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0186 ATGATTATGCCACAAATTTATGTATCAAATTCAAGTCCTTCACCTAGTTGTCTCACTCACATTTCTCAAAAGACATGCCTCCATGGCACTAGCTATTACCCTTCTTTTCAGGTTGGGTCAAGGCCATGGTTCCAAAACAAAAAGAGTGAAACAAGGGCCAGGAATGGGTACAATAATAGTAGCAATAATAAAATAAAAGCTGTGGCTGTGAGTGAACATGCAGAAAAGAAATCAGTTAAGGTTAAAGCTACTATAACTGTTCAGCTAACAGTTGGTGGATTATTCTCAGATTTGGGTTTAGAACGAGGAGCTGATGATATTACAGATTTACTTGGTAAATCATTGCACTTGGAGCTTGTTAGCACCACGCTTAATCCCAAGACGAAGAGAGAGAAAGACACGGTAAAAGGTTTCGCCCACAGAACATTTCAATTAGTAGACAAAGCAAAGTATGCGGCTGAATTTGATGTCCCACATAGTTTTGGAGAGATTGGAGCCATTTTTGTGGAGAATGAGCATCACAAGGAGATGTTTATCATTGACGTTTTGTTTGAAGGCTTCCCCACTGGTCCCTTTCATATATCATGCAACTCTTGGGTTCATTCCAAATTTGATAACCCTGCCAAGAGGGTTTTCTTCTCCAACAAGTCGTATTTGCCATCAGAAACACCAGAAGGGTTGAAGAGGATAAGAGGAGAGAAATTGATAGAATTGAGAGGGGATGGAGAAGGTGAAAGGAAGAAGTTCGAGAGTATATACGATTACGATGTATACAATGATATTGGAAATCCAGATCGTGATATCGAACTCAAAAGACCAGTTCTAGGTGGCAAACAAAATCCTTATCCTCGCCGTTGTAGAACCGGAAGACCTCGTTCCAAGACAGATCCATTATCTGAGGAAAGAAGTGACAATGTGTATGTTCCAAGAGATGAATGTTTCTCAGAAGTAAAGGAGCTAACGTTTTCTACAAAGGCTGTATATTCTGTGTTGCATGCTCTTGTTCCATCTCTGCAGACAGCTATAATTGACAAGGATCTTGGCTTTCCTGTCTTCTCAGCCATTGATGACTTATTTAATGAAGGGGTTAAATTGCCTATATTAAAAGGCAAAGGTCTTATTCGGAACATTTTACCAAGATTGATTAAGGTTGTTAAGGATACTGAGAAAGATATCCTCCGTTTTGAGACTCCAGCAACAATGGATAGGGACAGATTCTTTTGGTTTAGAGATGAAGAATTTGCTAGACAGACCCTTGCAGGCCTTAACCCATGTTGCATTGAACTCGTCACGGAATGGCCATTGAAAAGCAAGCTTGACCCTGATATATATGGCCCTGTGGAATCTGCAATCACCACTGAAACAATTGAGCAGGAAATCAAAGGATTCATGACTGTTGAAGAGGCCCTAAAACAGAAGAAGTTGTTCATCCTGGACTACCATGATTTGTTATTGCCAGTAGTAGAGAAAGTTAGAGAACTTGAAGGTACAACCCTTTATGGATCAAGGACATTGTTCTTCCTAAACAGTGATAGCACATTGAGGCCGCTAGCTATTGAGCTCACTCGGCCACCGATTAATGGAAAGCCACAGTGGAAGGAAGTGTTTACCCCTGCTTGGCACTCTACCAGTGTTTGGCTTTGGAGAATTGCCAAAGCTCATGTCCTTGCCCACGACTCTGGTTACCATCAACTTGTTAGTCACTGGCTAAGAACTCATTGTGCTACAGAACCTTATATCATCGCAACAAACAGGCAATTGAGTGCAATGCATCCAATCTATAGGCTTTTGCATCCACATTTTAGGTACACAATGGAGATTAATGCTCTTGCTCGTGAGGCATTGATAAATGCAAATGGAACCATAGAGAGCAGCTTTAGTCCTGGGAAGTATTCCATCCTACTAAGTTCAATTGCCTATGACAAGCAGTGGCAATTCAACTTGCAAGGCCTTCCTGCTGACCTTATCAATAGAGGATTGGCCGTTGAGGATCCTAATGCTCCTCATGGTTTAAAGCTAACCATAGAAGACTATCCTTATGCCAATGATGGCCTCGTCCTTTGGGACATTATCAAAGGATGGGTCACTGATTATGTGAGCCATTACTACTCAGAGCCGGGTCGAGTTGAGTCAGACAAAGAACTACAAGCATGGTGGGAAGAGATCCGAACCGTAGGCCATGGTGACAAGAAGGATGAACCATGGTGGCCTGTTTTGAAAAACAAAGAAGATTTGGTTGAAATTTTGACTACCATTGTGTGGATAACATCAGGGCACCATGCAGCTGTGAACTTTGGCCAATACCATTATGCAGGGTATTTCCCTAACAGGCCCACCATTACAAGATGCAACATGCCTACAGAGGACCCTTCAGACTCAGAATGGGAATTGTTCTTGGAAAAACCGGAAGCGACGCTTTTGAATACCTTCCCATCTCAAATTCAGGCTACAACTGTAATGACAGTGTTGGATATATTGTCAAATCACTCACCCGATGAAGAGTATCTTGGAGAAACCTTAGAGCCAGCTTGGGCAGACGATCCAATAGTCAAATCTGCATTTGAAAAGTTCAAGGGGAAATTGATGGAGCTAGAAGGTATAGTTGATGAAAGAAATGCAGATAGAACGCGTAAGAACAGAAACGGTGCGGGAATTGTGCCTTATGAGCTTCTGAAGCCGAAATCAGAGCCAGGAGTGACAGGAAAGGGAGTTCCATATAGCATTTCTATTTGA 2733 0.4201 MIMPQIYVSNSSPSPSCLTHISQKTCLHGTSYYPSFQVGSRPWFQNKKSETRARNGYNNSSNNKIKAVAVSEHAEKKSVKVKATITVQLTVGGLFSDLGLERGADDITDLLGKSLHLELVSTTLNPKTKREKDTVKGFAHRTFQLVDKAKYAAEFDVPHSFGEIGAIFVENEHHKEMFIIDVLFEGFPTGPFHISCNSWVHSKFDNPAKRVFFSNKSYLPSETPEGLKRIRGEKLIELRGDGEGERKKFESIYDYDVYNDIGNPDRDIELKRPVLGGKQNPYPRRCRTGRPRSKTDPLSEERSDNVYVPRDECFSEVKELTFSTKAVYSVLHALVPSLQTAIIDKDLGFPVFSAIDDLFNEGVKLPILKGKGLIRNILPRLIKVVKDTEKDILRFETPATMDRDRFFWFRDEEFARQTLAGLNPCCIELVTEWPLKSKLDPDIYGPVESAITTETIEQEIKGFMTVEEALKQKKLFILDYHDLLLPVVEKVRELEGTTLYGSRTLFFLNSDSTLRPLAIELTRPPINGKPQWKEVFTPAWHSTSVWLWRIAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIATNRQLSAMHPIYRLLHPHFRYTMEINALAREALINANGTIESSFSPGKYSILLSSIAYDKQWQFNLQGLPADLINRGLAVEDPNAPHGLKLTIEDYPYANDGLVLWDIIKGWVTDYVSHYYSEPGRVESDKELQAWWEEIRTVGHGDKKDEPWWPVLKNKEDLVEILTTIVWITSGHHAAVNFGQYHYAGYFPNRPTITRCNMPTEDPSDSEWELFLEKPEATLLNTFPSQIQATTVMTVLDILSNHSPDEEYLGETLEPAWADDPIVKSAFEKFKGKLMELEGIVDERNADRTRKNRNGAGIVPYELLKPKSEPGVTGKGVPYSISI 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0186 910 Gene3D - 318 405 IPR027433 -
Lal2g0186 910 PANTHER LIPOXYGENASE 32 908 IPR000907 GO:0016702|GO:0046872
Lal2g0186 910 Pfam Lipoxygenase 226 893 IPR013819 GO:0016702|GO:0046872
Lal2g0186 910 ProSiteProfiles PLAT domain profile. 83 214 IPR001024 GO:0005515
Lal2g0186 910 MobiDBLite consensus disorder prediction 273 303 - -
Lal2g0186 910 ProSitePatterns Lipoxygenases iron-binding region signature 1. 563 577 IPR020833 GO:0016702|GO:0046872
Lal2g0186 910 PRINTS Plant lipoxygenase signature 184 202 IPR001246 GO:0016491
Lal2g0186 910 PRINTS Plant lipoxygenase signature 210 231 IPR001246 GO:0016491
Lal2g0186 910 PRINTS Plant lipoxygenase signature 249 265 IPR001246 GO:0016491
Lal2g0186 910 PRINTS Plant lipoxygenase signature 281 300 IPR001246 GO:0016491
Lal2g0186 910 PRINTS Plant lipoxygenase signature 346 367 IPR001246 GO:0016491
Lal2g0186 910 PRINTS Plant lipoxygenase signature 393 409 IPR001246 GO:0016491
Lal2g0186 910 PRINTS Plant lipoxygenase signature 432 451 IPR001246 GO:0016491
Lal2g0186 910 PRINTS Plant lipoxygenase signature 500 524 IPR001246 GO:0016491
Lal2g0186 910 PRINTS Plant lipoxygenase signature 823 837 IPR001246 GO:0016491
Lal2g0186 910 SUPERFAMILY Lipoxigenase 219 910 IPR036226 -
Lal2g0186 910 Pfam PLAT/LH2 domain 148 213 IPR001024 GO:0005515
Lal2g0186 910 Gene3D - 219 317 - -
Lal2g0186 910 PANTHER LIPOXYGENASE 32 908 - -
Lal2g0186 910 CDD PLAT_LH2 79 215 IPR042057 -
Lal2g0186 910 Gene3D - 542 909 - -
Lal2g0186 910 SMART LH2_4 79 215 IPR001024 GO:0005515
Lal2g0186 910 Gene3D PLAT/LH2 domain 59 218 - -
Lal2g0186 910 MobiDBLite consensus disorder prediction 289 303 - -
Lal2g0186 910 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 79 218 IPR036392 GO:0005515
Lal2g0186 910 ProSitePatterns Lipoxygenases iron-binding region signature 2. 590 600 IPR020834 GO:0016702|GO:0046872
Lal2g0186 910 PRINTS Lipoxygenase signature 545 562 IPR013819 GO:0016702|GO:0046872
Lal2g0186 910 PRINTS Lipoxygenase signature 563 580 IPR013819 GO:0016702|GO:0046872
Lal2g0186 910 PRINTS Lipoxygenase signature 583 603 IPR013819 GO:0016702|GO:0046872
Lal2g0186 910 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 217 910 IPR013819 GO:0016702|GO:0046872
Lal2g0186 910 Gene3D - 407 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0186 Lal-Chr2 1096599 1101142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0186 157 910 Acyl Lipid Metabolism Gene Families AT3G45140 61.741 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0186 K00454 - gmx:100787202 1406.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0186 2 1096599 1101142 Lal2g0186 2 1096599 1101142 ECH
Lal1g0291 1 1724823 1733817 Lal2g0186 2 1096599 1101142 LSH