Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0291 ATGATAAAGCCTCAAGTATATCAATCAATACAGCATGCAAACCAAACCCTTCACTTTCCACCGAGGCCATTCATTCATGCCATTTTTGGCAATACTAGGAGTTCAAATCTTCCACTATGGTCGAAGAAACAAGTGTATATGCAAAAAGATAAGCGGTTCCTTCTTGTTTCTCAAAACATTAAAGCTAACCCTACTTCTTCTGCATCATCAGATAGTAGTAGTAGTAGTACTACTACTACTGATAAGAGCACAGATAAGAAGAGTACTGTGAAGGTTAAAACCATAGTTAAGGTGAAAATAACTGAGTCTGGCTTCTTCTCAAGTCTCAGATTAGACCGAGGAATTGATGATATAACAGATTTGCTTGGTAAATCTCTTCTCTTGGAGCTTGTTAGCTCTCACCTTCATCCTGAGACGGGACTAGAAAAGGAGACGATTAAAGCATATGTACACAAAACAGGAGAAGGTGAAAATTCAGTTAAGTATGAAACTGATTTTGAAATTCCAATTGATTTTGGAGACATTGGTGCAGTTCTTGTTGAGAATGAACATCACAAAGAAATGTTCCTTGAAACCATCCTTCTTAATGGTCTCCCACAAGGTCCTATTCATTTTGATTGTGCCTCTTGGGTTCACTCTAAGTTCGATAGTCCCACCAAAAGGATTTTCTTCACCAACAAGTGTTACTTACCTTCAGATACACCAAGTGGTTTAAGAAGATTAAGAACAGAAGAATTGGGCAATCTAAGAGGAAATGGAGAAGGAGAACGCAAGAGCTTTGAAAGAATATATGATTATGATATATACAATGACATTGGAGATCCAGATAGAGGCCTTGATCTTCAAAGACCTTCTTTGGGAGGCAAAGGACTACCTTATCCTAGACGTTGTCGAACCGGACGTCCACATAGCGAAGCAGATCCGTTGTCTGAAAAGAGAAATGGAAAATTTTATGTTCCAAGGGATGAGTGCTTCTCAGAGGTGAAGGAGCTAACGTTTTCTACCAAGTCCTTACACTGTGTGTTGCTGATATTGCTTCCATCTCTGGGTAAAATTATCAGAGATGGGGACCTTCCATTTCCATTCTTTCATGAGATAGATTCACTTTTCAACACTGGCCTTGACTTGCCTCCTGATGAATTGGAGAAGGGATTCCTAGAAGCCATCATGCCCAGGCTCGTGAGAAACATTTCGGGTGATCGGGGAAACATGCTTCGCTTCGAGACTCCGGAGACAATGAGCAGGGATAGGTTTTTCTGGTTTAGAGATGAGGAATTTGCTAGACAGACTGTTGCTGGTCTCAACCCATGTAGCATAAAGTTGGTTAAAGAATGGCCATTGAGGAGTAAACTTGATCCAGATATATATGGTCCAGCAGAATCAGCAATTACCTCAGAAATTATCAATAAGGAGATTGGAGGCATACTTCCTGTAGAAAAGGCAATAAAAGAAAAAAAGCTGTTCATGCTAGACTACCATGACTTGCTTTTACCATATGTTAGCAAAATACGCAAACTTAAGGGGAAAACGCTGTATGGTTCACGCACTTTGTTCTTTCTAACCCCGGATGGAACACTGAGACCTCTTGCCATTGAGCTGACTAGACCACCCATGGATGGAAAGGGACAATGGAAGCAAGTTTTCACAGCTAATTGGCACTCAACCAGTGTTTGGCTCTGGAGAATTGCCAAGGCCCATGTTCTTTCGCACGACTCTGGCTATCACCAGCTTGTTTGTCACTGGTTAAGAACTCACAGTGTGACAGAGCCCTATGTTATTGCAACTAACAGGCAACTTAGTGTGATGCATCCCATATATAGATTGCTCCATCCTCATTTTCGCTACACGATAGAAATTAACGCTTTGGCACGAGAAGCACTTATCAATGCTGGTGGCACAATTGAGAGTGCATTTTCACCTGGAAAGTATTCAATGGAGATTAGTTCTGCTGCCTATGATCTTGAATGGAGGTTTGACATGCAAGCTCTACCCGCGGACCTAATCATGAGGGGAATGGCTGAGAAAGATCCATTTGCTCCACATGGCTTAAGGCTAACAATTAAAGACTATCCCTATGCCAATGATGGACTCCTTCTATGGGACATTATAAAGCTATGGGTCACTGACTATGTCAACCATTATTACCCTGAACCTAGTCTTGTGGCCTTAGATGAGGAGCTCCAAGCATGGTGGACAGAGATTAGAACAGTTGGTCATGCTGACAAAAAAGATGAACCATGGTGGCCAGTTCTTCAAACTCCCAAAGACCTTATTGGAATCCTTAATATAATAATATGGGTAACTTCTGGTTATCATGCAGCAGTGAACTTTGGACAATATGCATATGGTGGTTATTTCCCAAATAGGCCTACAATTGCAAGGACTAAAGTCCCTTCAGAGGACCCTACAGAAGAAGAATGGAAAAAGTTCATTGCAAAACCTGAAAGATCACTTTTGAAGTGCTTTCCTTCACAACTTCAAGCAACTACAGTGATGGCTGTATTGGATATACTCTCAACTCATTCACCAGATGAGGAATACATAGGAGAGAAAATGGAACCATCATGGAGTGAAGATCCTGTGATAAAGGATGCCTTTGAACTGTTTAGACAGAGGTTGAAAAAATTAGAAGGATTGATTGATGCAAGGAATGAAGATGTAAACTTGAAGAACAGAAATGGAGCTGGCATTATGCCATATGAGCTTTTAAAGCCTTTCTCAAAACCAGGAGTCACTGGCATGGGGGTTCCCTGTAGTATATCTATATAG 2769 0.4106 MIKPQVYQSIQHANQTLHFPPRPFIHAIFGNTRSSNLPLWSKKQVYMQKDKRFLLVSQNIKANPTSSASSDSSSSSTTTTDKSTDKKSTVKVKTIVKVKITESGFFSSLRLDRGIDDITDLLGKSLLLELVSSHLHPETGLEKETIKAYVHKTGEGENSVKYETDFEIPIDFGDIGAVLVENEHHKEMFLETILLNGLPQGPIHFDCASWVHSKFDSPTKRIFFTNKCYLPSDTPSGLRRLRTEELGNLRGNGEGERKSFERIYDYDIYNDIGDPDRGLDLQRPSLGGKGLPYPRRCRTGRPHSEADPLSEKRNGKFYVPRDECFSEVKELTFSTKSLHCVLLILLPSLGKIIRDGDLPFPFFHEIDSLFNTGLDLPPDELEKGFLEAIMPRLVRNISGDRGNMLRFETPETMSRDRFFWFRDEEFARQTVAGLNPCSIKLVKEWPLRSKLDPDIYGPAESAITSEIINKEIGGILPVEKAIKEKKLFMLDYHDLLLPYVSKIRKLKGKTLYGSRTLFFLTPDGTLRPLAIELTRPPMDGKGQWKQVFTANWHSTSVWLWRIAKAHVLSHDSGYHQLVCHWLRTHSVTEPYVIATNRQLSVMHPIYRLLHPHFRYTIEINALAREALINAGGTIESAFSPGKYSMEISSAAYDLEWRFDMQALPADLIMRGMAEKDPFAPHGLRLTIKDYPYANDGLLLWDIIKLWVTDYVNHYYPEPSLVALDEELQAWWTEIRTVGHADKKDEPWWPVLQTPKDLIGILNIIIWVTSGYHAAVNFGQYAYGGYFPNRPTIARTKVPSEDPTEEEWKKFIAKPERSLLKCFPSQLQATTVMAVLDILSTHSPDEEYIGEKMEPSWSEDPVIKDAFELFRQRLKKLEGLIDARNEDVNLKNRNGAGIMPYELLKPFSKPGVTGMGVPCSISI 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0291 922 MobiDBLite consensus disorder prediction 298 312 - -
Lal1g0291 922 Pfam Lipoxygenase 237 905 IPR013819 GO:0016702|GO:0046872
Lal1g0291 922 MobiDBLite consensus disorder prediction 63 86 - -
Lal1g0291 922 PRINTS Plant lipoxygenase signature 195 213 IPR001246 GO:0016491
Lal1g0291 922 PRINTS Plant lipoxygenase signature 221 242 IPR001246 GO:0016491
Lal1g0291 922 PRINTS Plant lipoxygenase signature 260 276 IPR001246 GO:0016491
Lal1g0291 922 PRINTS Plant lipoxygenase signature 292 311 IPR001246 GO:0016491
Lal1g0291 922 PRINTS Plant lipoxygenase signature 357 378 IPR001246 GO:0016491
Lal1g0291 922 PRINTS Plant lipoxygenase signature 405 421 IPR001246 GO:0016491
Lal1g0291 922 PRINTS Plant lipoxygenase signature 444 463 IPR001246 GO:0016491
Lal1g0291 922 PRINTS Plant lipoxygenase signature 512 536 IPR001246 GO:0016491
Lal1g0291 922 PRINTS Plant lipoxygenase signature 835 849 IPR001246 GO:0016491
Lal1g0291 922 MobiDBLite consensus disorder prediction 63 83 - -
Lal1g0291 922 Gene3D - 437 571 - -
Lal1g0291 922 PANTHER LIPOXYGENASE 51 921 - -
Lal1g0291 922 ProSiteProfiles PLAT domain profile. 105 225 IPR001024 GO:0005515
Lal1g0291 922 Gene3D - 349 436 IPR027433 -
Lal1g0291 922 Gene3D - 572 920 - -
Lal1g0291 922 ProSitePatterns Lipoxygenases iron-binding region signature 1. 575 589 IPR020833 GO:0016702|GO:0046872
Lal1g0291 922 PANTHER LIPOXYGENASE 51 921 IPR000907 GO:0016702|GO:0046872
Lal1g0291 922 SMART LH2_4 94 226 IPR001024 GO:0005515
Lal1g0291 922 MobiDBLite consensus disorder prediction 291 312 - -
Lal1g0291 922 CDD PLAT_LH2 113 226 IPR042057 -
Lal1g0291 922 Pfam PLAT/LH2 domain 155 224 IPR001024 GO:0005515
Lal1g0291 922 ProSitePatterns Lipoxygenases iron-binding region signature 2. 602 612 IPR020834 GO:0016702|GO:0046872
Lal1g0291 922 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 228 922 IPR013819 GO:0016702|GO:0046872
Lal1g0291 922 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 91 229 IPR036392 GO:0005515
Lal1g0291 922 SUPERFAMILY Lipoxigenase 230 922 IPR036226 -
Lal1g0291 922 PRINTS Lipoxygenase signature 557 574 IPR013819 GO:0016702|GO:0046872
Lal1g0291 922 PRINTS Lipoxygenase signature 575 592 IPR013819 GO:0016702|GO:0046872
Lal1g0291 922 PRINTS Lipoxygenase signature 595 615 IPR013819 GO:0016702|GO:0046872
Lal1g0291 922 Gene3D - 248 345 - -
Lal1g0291 922 Gene3D PLAT/LH2 domain 86 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0291 Lal-Chr1 1724823 1733817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0291 168 922 Acyl Lipid Metabolism Gene Families AT3G45140 59.420 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0291 K00454 - gmx:100786646 1459.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0291 1 1724823 1733817 Lal1g0291 1 1724823 1733817 ECH
Lal1g0291 1 1724823 1733817 Lal2g0186 2 1096599 1101142 LSH